RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 CERS3Q8IU89 383 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 RASGRP4Q8TDF6 673 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 SCYL1Q96KG9 808 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 RAB3IPQ96QF0 476 aaPredicted RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 MMS19Q96T76 1030 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 CROCCP2Q86T23 111 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 ATP2A3Q93084 1043 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 LZTS2Q9BRK4 669 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 ARMCX3Q9UH62 379 aaPredicted RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 KDRP35968 1356 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 ADAM9Q13443 819 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 SNX1Q13596 522 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 NT5C3AQ9H0P0 336 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 MAGED2Q9UNF1 606 aaPredicted RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 USH1CQ9Y6N9 552 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 ADORA1P30542 326 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 RASSF2P50749 326 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 CACNB1Q02641 598 aaPredicted RBP9.35□□□□□ -0.91
ERCC4-201ENST00000311895 PPP4R1Q8TF05 950 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 GJA10Q969M2 543 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 CARD10Q9BWT7 1032 aa9.35□□□□□ -0.91
ERCC4-201ENST00000311895 ARHGEF12Q9NZN5 1544 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 ABL1P00519 1130 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 COPB1P53618 953 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 SPATA1Q5VX52 437 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 GLG1Q92896 1179 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 GLT8D2Q9H1C3 349 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 HIP1RO75146 1068 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 MESDQ14696 234 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 E2F5Q15329 346 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 CFAP61Q8NHU2 1237 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 DEPTORQ8TB45 409 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 CNOT6LQ96LI5 555 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 MED10Q9BTT4 135 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 KLRF2D3W0D1 207 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 STAM2O75886 525 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 OR52Z1P0C646 297 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 ITKQ08881 620 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 LRRC41Q15345 812 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 RPGRIP1Q96KN7 1286 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 RIC8AQ9NPQ8 531 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 RABGAP1Q9Y3P9 1069 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 H7C1D1 291 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 PDE6AP16499 860 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 SERPINB6P35237 376 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 CUL4BQ13620 913 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 MAP7Q14244 749 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 ZKSCAN8Q15776 578 aaPredicted RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 FAM98CQ17RN3 349 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 STAG1Q8WVM7 1258 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 P3H4Q92791 437 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 HOMER3Q9NSC5 361 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 PCDHA5Q9Y5H7 936 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 ABCC4O15439 1325 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 MRPS25P82663 173 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 PPP2R5BQ15173 497 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 MFSD14BQ5SR56 506 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 ARHGEF16Q5VV41 709 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 NLRX1Q86UT6 975 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 RNF169Q8NCN4 708 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 RIOK1Q9BRS2 568 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 LSG1Q9H089 658 aaKnown RBP9.34□□□□□ -0.91
ERCC4-201ENST00000311895 FAN1Q9Y2M0 1017 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 MAD1L1Q9Y6D9 718 aa9.34□□□□□ -0.91
ERCC4-201ENST00000311895 SOWAHDA6NJG2 315 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 LIG4P49917 911 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 UBXN2AP68543 259 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 COG7P83436 770 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 FAM71BQ8TC56 605 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
ERCC4-201ENST00000311895 ANKFY1Q9P2R3 1169 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 KDM3AQ9Y4C1 1321 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 SCG2P13521 617 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 ATF2P15336 505 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 PDE6CP51160 858 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 ZNF589Q86UQ0 364 aaPredicted RBP9.33□□□□□ -0.92
ERCC4-201ENST00000311895 SESTD1Q86VW0 696 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 ACRBPQ8NEB7 543 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 CACTINQ8WUQ7 758 aaKnown RBP9.33□□□□□ -0.92
ERCC4-201ENST00000311895 NSMCE1Q8WV22 266 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 MAIP1Q8WWC4 291 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 EPB41L5Q9HCM4 733 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 SMYD2Q9NRG4 433 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 ZNF148Q9UQR1 794 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 M0R2C6 588 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 CDC25AP30304 524 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 PHBP35232 272 aa9.33□□□□□ -0.92
ERCC4-201ENST00000311895 RCN2Q14257 317 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms