RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 AP3B2Q13367 1082 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TAF11Q15544 211 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 HERC4Q5GLZ8 1057 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 RINT1Q6NUQ1 792 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MYCT1Q8N699 235 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC63Q8NA47 563 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TRIM58Q8NG06 486 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CDKL2Q92772 493 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 FAM83GA6ND36 823 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TRAPPC3O43617 180 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 USP17L8P0C7I0 530 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TMEM191BP0C7N4 346 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 SKIP12755 728 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TNNI1P19237 187 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 GNG11P61952 73 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TFAP4Q01664 338 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 GUCY1B3Q02153 619 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 CIAPIN1Q6FI81 312 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TMC6Q7Z403 805 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 KIRREL3Q8IZU9 778 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 DDX50Q9BQ39 737 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 TIPINQ9BVW5 301 aa3.51□□□□□ -1.85
CLOCK-201ENST00000309964 FOXP1Q9H334 677 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 MRPL47Q9HD33 250 aaKnown RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 PRDM15P57071 1507 aaPredicted RBP3.51□□□□□ -1.85
CLOCK-201ENST00000309964 INO80Q9ULG1 1556 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SPOPO43791 374 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CRCPO75575 148 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SERPINB2P05120 415 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 KRT5P13647 590 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TNFAIP3P21580 790 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ASPHQ12797 758 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PSMD2Q13200 908 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 DCAF17Q5H9S7 520 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MIER3Q7Z3K6 550 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 IFT20Q8IY31 132 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC89Q8N998 374 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MIGA1Q8NAN2 632 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SNX29Q8TEQ0 813 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PCDHA1Q9Y5I3 950 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 KLRF2D3W0D1 207 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 IFNA8P32881 189 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 RNASELQ05823 741 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PAK1Q13153 545 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MTMR3Q13615 1198 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CAMK4Q16566 473 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CFAP221Q4G0U5 840 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 FYB2Q5VWT5 728 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GADL1Q6ZQY3 521 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 THEM5Q8N1Q8 247 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CSGALNACT2Q8N6G5 542 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PNMA1Q8ND90 353 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 LPAR1Q92633 364 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ZSCAN10Q96SZ4 725 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 NKIRAS1Q9NYS0 192 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 IQGAP1P46940 1657 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SPATA31A3Q5VYP0 1347 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 AKR1B15C9JRZ8 316 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CHMLP26374 656 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 JAK3P52333 1124 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 EIF4A1P60842 406 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SKIDA1Q1XH10 827 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ARL13BQ3SXY8 428 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 FAM47CQ5HY64 1035 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TRIM42Q8IWZ5 723 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 C8orf58Q8NAV2 365 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TIGD1Q96MW7 591 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TBC1D22BQ9NU19 505 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MAP3K20Q9NYL2 800 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PCDHB8Q9UN66 801 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TULP4Q9NRJ4 1543 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 VWA3AA6NCI4 1184 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ARHGAP6O43182 974 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 UQCRHP07919 91 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CCND2P30279 289 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 AFMP43652 599 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MFSD14CQ5VZR4 134 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC129Q6ZRS4 1044 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PALM2Q8IXS6 379 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 METTL13Q8N6R0 699 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 DNAJC5Q9H3Z4 198 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ZNF532Q9HCE3 1301 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MYH6P13533 1939 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TESPA1A2RU30 521 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GOLGA8JA6NMD2 632 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SGSM2O43147 1006 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SFNP31947 248 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GRAPQ13588 217 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 NEDD9Q14511 834 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TTC38Q5R3I4 469 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ARL6IP4Q66PJ3 421 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PPP1R18Q6NYC8 613 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TADA2BQ86TJ2 420 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MB21D1Q8N884 522 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GRAPLQ8TC17 118 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 OPTNQ96CV9 577 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 RIC8AQ9NPQ8 531 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ARMCX3Q9UH62 379 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 KCNH3Q9ULD8 1083 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms