RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 RPUSD2Q8IZ73 545 aaKnown RBP6.73□□□□□ -1.33
SEC22A-201ENST00000309934 CCDC82Q8N4S0 544 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 CDHR1Q96JP9 859 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 IBSPP21815 317 aaPredicted RBP6.73□□□□□ -1.33
SEC22A-201ENST00000309934 SCNN1DP51172 638 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 NLRP12P59046 1061 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 AOC3Q16853 763 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 SYDE2Q5VT97 1194 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 WWC2Q6AWC2 1192 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 NLRX1Q86UT6 975 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 EXOC8Q8IYI6 725 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 MTMR14Q8NCE2 650 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 RBM46Q8TBY0 533 aaKnown RBP6.73□□□□□ -1.33
SEC22A-201ENST00000309934 RNF217Q8TC41 542 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 TMEM47Q9BQJ4 181 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 PSTPIP2Q9H939 334 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 VAT1LQ9HCJ6 419 aa6.73□□□□□ -1.33
SEC22A-201ENST00000309934 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.73□□□□□ -1.33
SEC22A-201ENST00000309934 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.73□□□□□ -1.33
SEC22A-201ENST00000309934 SRPRBQ9Y5M8 271 aaKnown RBP6.73□□□□□ -1.33
SEC22A-201ENST00000309934 C19orf81C9J6K1 198 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 GCOM1H8Y6P7 765 aaPredicted RBP6.72□□□□□ -1.33
SEC22A-201ENST00000309934 OR52Z1P0C646 297 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 POLR2MP0CAP2 368 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
SEC22A-201ENST00000309934 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 ARMC9Q7Z3E5 817 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 CCDC65Q8IXS2 484 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 LINC00301Q8NCQ3 95 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 FAM212AQ96EL1 285 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 SLC5A4Q9NY91 659 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 FBXO40Q9UH90 709 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 JAG2Q9Y219 1238 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 SH3BP1Q9Y3L3 701 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 PHLPP2Q6ZVD8 1323 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 COL2A1P02458 1487 aaPredicted RBP6.72□□□□□ -1.33
SEC22A-201ENST00000309934 H0YCG3 227 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 ZBTB5O15062 677 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 TBC1D12O60347 775 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 STAT2P52630 851 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 WDR78Q5VTH9 848 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 CDC42EP5Q6NZY7 148 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 XRRA1Q6P2D8 792 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 USP17L2Q6R6M4 530 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 ARHGAP27Q6ZUM4 889 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 GMCL1P1Q8NEA9 526 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 NEK9Q8TD19 979 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 PHKBQ93100 1093 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 NBPF3Q9H094 633 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 BARHL2Q9NY43 387 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 MTMR4Q9NYA4 1195 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 TBCAO75347 108 aaKnown RBP6.72□□□□□ -1.33
SEC22A-201ENST00000309934 DPEP1P16444 411 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 CALCRLQ16602 461 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 IWS1Q96ST2 819 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 GPCPD1Q9NPB8 672 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 IMPACTQ9P2X3 320 aa6.72□□□□□ -1.33
SEC22A-201ENST00000309934 USP17L5A8MUK1 530 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 LMNB1P20700 586 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 SCP2P22307 547 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 ANTXR2P58335 489 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 CETN1Q12798 172 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 CCDC70Q6NSX1 233 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 MOXD1Q6UVY6 613 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 PIK3AP1Q6ZUJ8 805 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 GSDMAQ96QA5 445 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 WDR11Q9BZH6 1224 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 PLIN4Q96Q06 1357 aa6.71□□□□□ -1.33
SEC22A-201ENST00000309934 LY75O60449 1722 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ZSCAN12O43309 604 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 GTPBP6O43824 516 aaPredicted RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ZNF202O95125 648 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 RASA1P20936 1047 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 USP11P51784 963 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 DBN1Q16643 649 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 RINLQ6ZS11 566 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 C3orf67Q6ZVT6 689 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 KRT222Q8N1A0 295 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 GMCL1Q96IK5 515 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 PCMTD1Q96MG8 357 aaPredicted RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 USP28Q96RU2 1077 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.71□□□□□ -1.343e-23■■■■■ 559
SEC22A-201ENST00000309934 GOLGA6L10A6NI86 522 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 TBX3O15119 743 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 WDR46O15213 610 aaKnown RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 MAFGO15525 162 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 VIL1P09327 827 aaKnown RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ZSCAN20P17040 1043 aaPredicted RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 OSBPP22059 807 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ERCC5P28715 1186 aaPredicted RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 MYL5Q02045 173 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 SEC23AQ15436 765 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 GNPTABQ3T906 1256 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 DACT2Q5SW24 774 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 APBB1IPQ7Z5R6 666 aaPredicted RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 OTUD6BQ8N6M0 293 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 BPIFA3Q9BQP9 254 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 ZNF70Q9UC06 446 aaPredicted RBP6.71□□□□□ -1.34
SEC22A-201ENST00000309934 GNA14O95837 355 aa6.71□□□□□ -1.34
SEC22A-201ENST00000309934 RPL13P26373 211 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms