RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 COL13A1Q5TAT6 717 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-201ENST00000309641 WDR78Q5VTH9 848 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 OTOP1Q7RTM1 612 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 GTF3C2Q8WUA4 911 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-201ENST00000309641 UPF2Q9HAU5 1272 aaKnown RBP10.59□□□□□ -0.71
PDE4D-201ENST00000309641 TPCN1Q9ULQ1 816 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 GABRQQ9UN88 632 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 TRIM17Q9Y577 477 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 MGAMO43451 1857 aa10.59□□□□□ -0.71
PDE4D-201ENST00000309641 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 DHX16O60231 1041 aaKnown RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 PPP1R11O60927 126 aaPredicted RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 LARGE1O95461 756 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 EVCP57679 992 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 CCT2P78371 535 aaKnown RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 STK3Q13188 491 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 GPR142Q7Z601 462 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 NCAPG2Q86XI2 1143 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 RIOX2Q8IUF8 465 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 ERO1AQ96HE7 468 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 TEX13BQ9BXU2 312 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 RIOX1Q9H6W3 641 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 PRDM10Q9NQV6 1147 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 HOMER2Q9NSB8 354 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 ATP2A1O14983 1001 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 CD2BP2O95400 341 aaKnown RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 PRKCZQ05513 592 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 FUT2Q10981 343 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
PDE4D-201ENST00000309641 RTN1Q16799 776 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 QRICH1Q2TAL8 776 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 MUM1L1Q5H9M0 696 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 SYNE3Q6ZMZ3 975 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 MTMR8Q96EF0 704 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 PIGSQ96S52 555 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 MAP3K14Q99558 947 aa10.58□□□□□ -0.72
PDE4D-201ENST00000309641 ALAS1P13196 640 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 KIF5BP33176 963 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDE4D-201ENST00000309641 FCGRTP55899 365 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 KIF22Q14807 665 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 USH1GQ495M9 461 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 TMTC3Q6ZXV5 915 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 ALDH8A1Q9H2A2 487 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-201ENST00000309641 GJD2Q9UKL4 321 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CCPG1Q9ULG6 757 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CTDP1Q9Y5B0 961 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-201ENST00000309641 PLXNB2O15031 1838 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 ICAM1P05362 532 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CALM1P0DP23 149 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CALM2P0DP24 149 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CALM3P0DP25 149 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 MAPK4P31152 587 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 FLT3LGP49771 235 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CCNA1P78396 465 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 ME3Q16798 604 aa10.57□□□□□ -0.72
PDE4D-201ENST00000309641 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
PDE4D-201ENST00000309641 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
PDE4D-201ENST00000309641 CNTNAP5Q8WYK1 1306 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 NFIBO00712 420 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 FDX1P10109 184 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 OAZ1P54368 228 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 NTRK3Q16288 839 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 MORN1Q5T089 497 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 PLEKHH3Q7Z736 793 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 NECAB1Q8N987 351 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 SHCBP1Q8NEM2 672 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 TBC1D5Q92609 795 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 SPZ1Q9BXG8 430 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 RNF146Q9NTX7 359 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 SRRDQ9UH36 339 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 MYH6P13533 1939 aa10.56□□□□□ -0.72
PDE4D-201ENST00000309641 ZBTB5O15062 677 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 COBLO75128 1261 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 SLC25A27O95847 323 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 PGK2P07205 417 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 PTPREP23469 700 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 ST3GAL1Q11201 340 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 SCRN1Q12765 414 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 CLEC4DQ8WXI8 215 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 PHKBQ93100 1093 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 COA7Q96BR5 231 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 ZNF274Q96GC6 653 aaPredicted RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 TRERF1Q96PN7 1200 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 PTCH2Q9Y6C5 1203 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
PDE4D-201ENST00000309641 NID2Q14112 1375 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 OPLAHO14841 1288 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 CYP2B6P20813 491 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 ADORA2AP29274 412 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 GNAQP50148 359 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 RCAN1P53805 252 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 GRB14Q14449 540 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 RABEP1Q15276 862 aa10.55□□□□□ -0.72
PDE4D-201ENST00000309641 CCL14Q16627 93 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms