RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 RGPD5Q99666 1765 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 PP2D1A8MPX8 630 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 EXOC5O00471 708 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 CALM1P0DP23 149 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 CALM2P0DP24 149 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 CALM3P0DP25 149 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 IL2RBP14784 551 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 ASIC1P78348 528 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 RNF187Q5TA31 235 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 AMOTL1Q8IY63 956 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 IFT81Q8WYA0 676 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 RRP36Q96EU6 259 aaKnown RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 LRRC1Q9BTT6 524 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 FECHP22830 423 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 GUCY2CP25092 1073 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 PMS1P54277 932 aaKnown RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 C8orf74Q6P047 294 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 TANGO6Q9C0B7 1094 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 FAM207AQ9NSI2 230 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-201ENST00000309017 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
PTPN7-201ENST00000309017 MOCS3O95396 460 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 PDCLQ13371 301 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 TDRD12Q587J7 1177 aaKnown RBP12.43□□□□□ -0.42
PTPN7-201ENST00000309017 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 FBXW10Q5XX13 1052 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 TRIM58Q8NG06 486 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 NUP58Q9BVL2 599 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 MST1RQ04912 1400 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 ATRNO75882 1429 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 RCCD1A6NED2 376 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 GOLGA8KD6RF30 607 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 SCG2P13521 617 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 IBSPP21815 317 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-201ENST00000309017 PDE4DQ08499 809 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-201ENST00000309017 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 HDAC7Q8WUI4 952 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 GPKOWQ92917 476 aaPredicted RBP eCLIP12.43□□□□□ -0.42
PTPN7-201ENST00000309017 SHISA4Q96DD7 197 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
PTPN7-201ENST00000309017 DNAJC7Q99615 494 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 MTRQ99707 1265 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 TSGA10Q9BZW7 698 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 DMGDHQ9UI17 866 aaKnown RBP12.43□□□□□ -0.42
PTPN7-201ENST00000309017 CAPN7Q9Y6W3 813 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 VAV2P52735 878 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 WDR59Q6PJI9 974 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 ADSSL1Q8N142 457 aa12.43□□□□□ -0.42
PTPN7-201ENST00000309017 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 ZPR1O75312 459 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 RCAN1P53805 252 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 ZBED6P86452 979 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 DISC1Q9NRI5 854 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 A0A1W2PQC6 194 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 ANO9A1A5B4 782 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 NMT2O60551 498 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 LONP1P36776 959 aaKnown RBP12.42□□□□□ -0.42
PTPN7-201ENST00000309017 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
PTPN7-201ENST00000309017 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 TMTC3Q6ZXV5 915 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 RNASE9P60153 205 aaKnown RBP12.42□□□□□ -0.42
PTPN7-201ENST00000309017 DYNLL1P63167 89 aaKnown RBP12.42□□□□□ -0.42
PTPN7-201ENST00000309017 SEC23AQ15436 765 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 GBP6Q6ZN66 633 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
PTPN7-201ENST00000309017 CCDC170Q8IYT3 715 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-201ENST00000309017 THAP9Q9H5L6 903 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 EHD2Q9NZN4 543 aa12.42□□□□□ -0.42
PTPN7-201ENST00000309017 CCDC91Q7Z6B0 441 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 IRF2BP1Q8IU81 584 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 SH2D3CQ8N5H7 860 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 TCP11L1Q9NUJ3 509 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 BICDL2A1A5D9 508 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 USP17L21D6R901 530 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 AGPSO00116 658 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 EIF3HO15372 352 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 BUB1O43683 1085 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 PLEKP08567 350 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 CALML3P27482 149 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 MAATS1Q7Z4T9 603 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 SRBD1Q8N5C6 995 aaKnown RBP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 NOC3LQ8WTT2 800 aaKnown RBP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 SNX12Q9UMY4 172 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 LOC102724159A0A0B4J2E5 919 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 NCK2O43639 380 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 MAGEA1P43355 309 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms