RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CASP14P31944 242 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 TECP42680 631 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 PPFIBP1Q86W92 1011 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 ZC3H12CQ9C0D7 883 aaKnown RBP21.05■□□□□ 0.96
RNF139-201ENST00000303545 ZMYND12Q9H0C1 365 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 PCDHAC2Q9Y5I4 1007 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 URI1O94763 535 aaPredicted RBP21.05■□□□□ 0.96
RNF139-201ENST00000303545 PMS1P54277 932 aaKnown RBP21.05■□□□□ 0.96
RNF139-201ENST00000303545 SLC27A3Q5K4L6 730 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 SOGA3Q5TF21 947 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 ZNF658Q5TYW1 1059 aaPredicted RBP21.05■□□□□ 0.96
RNF139-201ENST00000303545 SLF2Q8IX21 1173 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 DAGLBQ8NCG7 672 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 TBCKQ8TEA7 893 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 UIMC1Q96RL1 719 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 USP40Q9NVE5 1235 aa21.05■□□□□ 0.96
RNF139-201ENST00000303545 N4BP3O15049 544 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 CACNB3P54284 484 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 ERCC6LQ2NKX8 1250 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 FAM163AQ96GL9 167 aaPredicted RBP21.04■□□□□ 0.96
RNF139-201ENST00000303545 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
RNF139-201ENST00000303545 ZBTB22O15209 634 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 STX10O60499 249 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 PDHBP11177 359 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 NONOQ15233 471 aaKnown RBP eCLIP21.04■□□□□ 0.96
RNF139-201ENST00000303545 KMT5BQ4FZB7 885 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 SP8Q8IXZ3 490 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 WDR24Q96S15 920 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 IRX2Q9BZI1 471 aaPredicted RBP21.04■□□□□ 0.96
RNF139-201ENST00000303545 C6orf50Q9HD87 102 aa21.04■□□□□ 0.96
RNF139-201ENST00000303545 ADAMTSL1Q8N6G6 1762 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 FAM196BA6NMK8 535 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 G3V3G9 751 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 PES1O00541 588 aaKnown RBP21.03■□□□□ 0.96
RNF139-201ENST00000303545 ZSCAN12O43309 604 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 PLCG1P19174 1290 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 FILIP1LQ4L180 1135 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 DCAF8Q5TAQ9 597 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 LZTS2Q9BRK4 669 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 RNF225M0QZC1 329 aaPredicted RBP21.03■□□□□ 0.96
RNF139-201ENST00000303545 FXR1P51114 621 aaKnown RBP eCLIP21.03■□□□□ 0.96
RNF139-201ENST00000303545 GNG11P61952 73 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 ERO1AQ96HE7 468 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 DBNDD1Q9H9R9 158 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 MTMR4Q9NYA4 1195 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 RWDD2AQ9UIY3 292 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 ATP6V0A2Q9Y487 856 aa21.03■□□□□ 0.96
RNF139-201ENST00000303545 KCNJ18B7U540 433 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 CCP110O43303 1012 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 SLC16A2P36021 539 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 KCNJ12Q14500 433 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 SHROOM1Q2M3G4 852 aaPredicted RBP21.02■□□□□ 0.96
RNF139-201ENST00000303545 TTBK2Q6IQ55 1244 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 RAD9BQ6WBX8 426 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 CABP7Q86V35 215 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 MRPL44Q9H9J2 332 aaKnown RBP21.02■□□□□ 0.96
RNF139-201ENST00000303545 LZTFL1Q9NQ48 299 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 OR52Z1P0C646 297 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 TXKP42681 527 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 COL23A1Q86Y22 540 aaPredicted RBP21.02■□□□□ 0.96
RNF139-201ENST00000303545 ZFPM1Q8IX07 1006 aa21.02■□□□□ 0.96
RNF139-201ENST00000303545 GYPCP04921 128 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 PBX1P40424 430 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 NFIAQ12857 509 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 SYCP1Q15431 976 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 GALNT17Q6IS24 598 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 HPS3Q969F9 1004 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 L2HGDHQ9H9P8 463 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.01■□□□□ 0.95
RNF139-201ENST00000303545 MYH8P13535 1937 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 SRGNP10124 158 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 TCP10Q12799 353 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 CCDC93Q567U6 631 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 TCP11X2Q5H9J9 407 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 KRT25Q7Z3Z0 450 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 NEK8Q86SG6 692 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 CERS3Q8IU89 383 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 PYM1Q9BRP8 204 aaKnown RBP21.01■□□□□ 0.95
RNF139-201ENST00000303545 COA1Q9GZY4 146 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 RMND1Q9NWS8 449 aa21.01■□□□□ 0.95
RNF139-201ENST00000303545 KLRC4O43908 158 aa21■□□□□ 0.95
RNF139-201ENST00000303545 GNA11P29992 359 aa21■□□□□ 0.95
RNF139-201ENST00000303545 COPB1P53618 953 aaKnown RBP21■□□□□ 0.95
RNF139-201ENST00000303545 UBE2SQ16763 222 aa21■□□□□ 0.95
RNF139-201ENST00000303545 REXO1Q8N1G1 1221 aaKnown RBP21■□□□□ 0.95
RNF139-201ENST00000303545 GJA10Q969M2 543 aa21■□□□□ 0.95
RNF139-201ENST00000303545 ZNF622Q969S3 477 aaKnown RBP eCLIP21■□□□□ 0.95
RNF139-201ENST00000303545 CTAGE1Q96RT6 745 aa21■□□□□ 0.95
RNF139-201ENST00000303545 CT47A1Q5JQC4 288 aaPredicted RBP21■□□□□ 0.95
RNF139-201ENST00000303545 KCTD1Q719H9 257 aa21■□□□□ 0.95
RNF139-201ENST00000303545 CCDC12Q8WUD4 166 aaPredicted RBP21■□□□□ 0.95
RNF139-201ENST00000303545 ANKRD31Q8N7Z5 1873 aa20.99■□□□□ 0.95
RNF139-201ENST00000303545 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
RNF139-201ENST00000303545 CDC42EP5Q6NZY7 148 aa20.99■□□□□ 0.95
RNF139-201ENST00000303545 FBXO38Q6PIJ6 1188 aa20.99■□□□□ 0.95
RNF139-201ENST00000303545 MFAP3LO75121 409 aa20.99■□□□□ 0.95
RNF139-201ENST00000303545 TDP2O95551 362 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms