RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 VPS52Q8N1B4 723 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 CACTINQ8WUQ7 758 aaKnown RBP23.17■■□□□ 1.3
LETM1-201ENST00000302787 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 ALDH1B1P30837 517 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 PTPROQ16827 1216 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 CCDC62Q6P9F0 684 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 MGARPQ8TDB4 240 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 RABGGTAQ92696 567 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 ARHGEF2Q92974 986 aaKnown RBP23.17■■□□□ 1.3
LETM1-201ENST00000302787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.35e-7■■■■□ 25.6
LETM1-201ENST00000302787 CDC23Q9UJX2 597 aa23.17■■□□□ 1.3
LETM1-201ENST00000302787 TPD52P55327 224 aaPredicted RBP23.16■■□□□ 1.3
LETM1-201ENST00000302787 LGSNQ5TDP6 509 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 OTUD6AQ7L8S5 288 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 LMNTD2Q8IXW0 634 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 USP6P35125 1406 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 YEATS2Q9ULM3 1422 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 A0A087WWV3 80 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 ATP2B4P23634 1241 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 TRAPPC10P48553 1259 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 NLRX1Q86UT6 975 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 CCDC89Q8N998 374 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 ANKRD42Q8N9B4 389 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 ADD2P35612 726 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 DLGAP5Q15398 846 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 PPP2R5EQ16537 467 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 FAM102BQ5T8I3 360 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 SRGAP1Q7Z6B7 1085 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 GOLGA5Q8TBA6 731 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 TUBGCP2Q9BSJ2 902 aa23.16■■□□□ 1.3
LETM1-201ENST00000302787 DDX23Q9BUQ8 820 aaKnown RBP23.15■■□□□ 1.3
LETM1-201ENST00000302787 RBL2Q08999 1139 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 SLC35F6Q8N357 371 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 MED4Q9NPJ6 270 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 STK32BQ9NY57 414 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 GINS2Q9Y248 185 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 FAM71BQ8TC56 605 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 METTL14Q9HCE5 456 aaKnown RBP23.15■■□□□ 1.3
LETM1-201ENST00000302787 KCNG1Q9UIX4 513 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 I3L4J1 428 aa23.15■■□□□ 1.3
LETM1-201ENST00000302787 POLA2Q14181 598 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 GEN1Q17RS7 908 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 LAD1O00515 517 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 NOL3O60936 208 aaKnown RBP23.14■■□□□ 1.3
LETM1-201ENST00000302787 IRX3P78415 501 aaPredicted RBP23.14■■□□□ 1.3
LETM1-201ENST00000302787 CAPS2Q9BXY5 557 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 DPH5Q9H2P9 285 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 CUEDC2Q9H467 287 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 PCDHA4Q9UN74 947 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 COL4A3BPQ9Y5P4 624 aa23.14■■□□□ 1.3
LETM1-201ENST00000302787 CDK12Q9NYV4 1490 aaPredicted RBP23.14■■□□□ 1.29
LETM1-201ENST00000302787 K7ENM7 598 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 ATP1A2P50993 1020 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 RESTQ13127 1097 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 PDE11AQ9HCR9 933 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 N4BP1O75113 896 aaKnown RBP23.14■■□□□ 1.29
LETM1-201ENST00000302787 H2AFZP0C0S5 128 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 STX2P32856 288 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 H2AFVQ71UI9 128 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 PI4K2BQ8TCG2 481 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 MAN1B1Q9UKM7 699 aa23.14■■□□□ 1.29
LETM1-201ENST00000302787 GRM1Q13255 1194 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 ARHGEF25Q86VW2 580 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 FBXO11Q86XK2 927 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 HOOK2Q96ED9 719 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 POLR2MP0CAP2 368 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 PTPN21Q16825 1174 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 EEF2KMTQ96G04 330 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 FAM178BQ8IXR5 827 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 SMYD4Q8IYR2 804 aaPredicted RBP23.13■■□□□ 1.29
LETM1-201ENST00000302787 TRIM6Q9C030 488 aaPredicted RBP23.13■■□□□ 1.29
LETM1-201ENST00000302787 PLEKHG1Q9ULL1 1385 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 SH2B2O14492 632 aaPredicted RBP23.13■■□□□ 1.29
LETM1-201ENST00000302787 RNF40O75150 1001 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 CLNS1AP54105 237 aaKnown RBP23.13■■□□□ 1.29
LETM1-201ENST00000302787 TAF12Q16514 161 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 ANKRD13CQ8N6S4 541 aa23.13■■□□□ 1.29
LETM1-201ENST00000302787 PRPF6O94906 941 aaKnown RBP23.12■■□□□ 1.29
LETM1-201ENST00000302787 MMP1P03956 469 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 PROCA1Q8NCQ7 364 aaPredicted RBP23.12■■□□□ 1.29
LETM1-201ENST00000302787 ZNF804BA4D1E1 1349 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 EEF1GP26641 437 aaKnown RBP23.12■■□□□ 1.29
LETM1-201ENST00000302787 GRAMD1CQ8IYS0 662 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 DEPTORQ8TB45 409 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 OSBP2Q969R2 916 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 ATP10DQ9P241 1426 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 PHLPP2Q6ZVD8 1323 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 CRCPO75575 148 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 CERKLQ49MI3 558 aaPredicted RBP23.12■■□□□ 1.29
LETM1-201ENST00000302787 ARHGAP24Q8N264 748 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 P3H4Q92791 437 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 PUS7LQ9H0K6 701 aaKnown RBP23.12■■□□□ 1.29
LETM1-201ENST00000302787 ABCA8O94911 1581 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 RASSF7Q02833 373 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
LETM1-201ENST00000302787 NECTIN1Q15223 517 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 GRK7Q8WTQ7 553 aa23.12■■□□□ 1.29
LETM1-201ENST00000302787 CCT6BQ92526 530 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms