RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 RCSD1Q6JBY9 416 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 PDXDC2PQ6P474 469 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 AMOTL1Q8IY63 956 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 ABHD10Q9NUJ1 306 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.08■□□□□ 0
CTDP1-202ENST00000299543 SPATA31A1Q5TZJ5 1347 aa15.08■□□□□ 0
CTDP1-202ENST00000299543 NID2Q14112 1375 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 PARP1P09874 1014 aaKnown RBP15.07■□□□□ 0
CTDP1-202ENST00000299543 PMS1P54277 932 aaKnown RBP15.07■□□□□ 0
CTDP1-202ENST00000299543 ZNF658Q5TYW1 1059 aaPredicted RBP15.07■□□□□ 0
CTDP1-202ENST00000299543 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 RABGGTAQ92696 567 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
CTDP1-202ENST00000299543 IL17RBQ9NRM6 502 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 ARPP21Q9UBL0 812 aaPredicted RBP15.07■□□□□ 0
CTDP1-202ENST00000299543 CDC23Q9UJX2 597 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 SUFUQ9UMX1 484 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 GRIK5Q16478 980 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 LONRF2Q1L5Z9 754 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 NCAPH2Q6IBW4 605 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 CYP26C1Q6V0L0 522 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 TMTC1Q8IUR5 882 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 CAPZA3Q96KX2 299 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 NAA15Q9BXJ9 866 aaKnown RBP15.07■□□□□ 0
CTDP1-202ENST00000299543 RMND1Q9NWS8 449 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 RWDD2AQ9UIY3 292 aa15.07■□□□□ 0
CTDP1-202ENST00000299543 GOLGB1Q14789 3259 aaKnown RBP15.06■□□□□ 0
CTDP1-202ENST00000299543 ORC4O43929 436 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 NAPAP54920 295 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 HPS3Q969F9 1004 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 PCDHA4Q9UN74 947 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 LUC7L2Q9Y383 392 aaKnown RBP15.06■□□□□ 0
CTDP1-202ENST00000299543 DISP2A7MBM2 1401 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 TTC26A0AVF1 554 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 CCNT1O60563 726 aaKnown RBP15.06■□□□□ 0
CTDP1-202ENST00000299543 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
CTDP1-202ENST00000299543 SPAG1Q07617 926 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 STIM1Q13586 685 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 KAT2BQ92831 832 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 DISC1Q9NRI5 854 aa15.06■□□□□ 0
CTDP1-202ENST00000299543 B4DLN1 442 aa15.05■□□□□ 0
CTDP1-202ENST00000299543 RAD21O60216 631 aa15.05■□□□□ 0
CTDP1-202ENST00000299543 RSRC2Q7L4I2 434 aaKnown RBP15.05■□□□□ 0
CTDP1-202ENST00000299543 NAPGQ99747 312 aaPredicted RBP15.05■□□□□ 0
CTDP1-202ENST00000299543 UBA5Q9GZZ9 404 aa15.05■□□□□ 0
CTDP1-202ENST00000299543 COL4A1P02462 1669 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 PBX1P40424 430 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 ASIC1P78348 528 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 USP17L2Q6R6M4 530 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 KIAA1328Q86T90 577 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 HDAC6Q9UBN7 1215 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 TTF2Q9UNY4 1162 aaKnown RBP15.05■□□□□ -0
CTDP1-202ENST00000299543 CHD4Q14839 1912 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 LONP1P36776 959 aaKnown RBP15.05■□□□□ -0
CTDP1-202ENST00000299543 TECP42680 631 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 LIG3P49916 1009 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 FBXW10Q5XX13 1052 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 CSGALNACT2Q8N6G5 542 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
CTDP1-202ENST00000299543 EPN1Q9Y6I3 576 aaPredicted RBP15.05■□□□□ -0
CTDP1-202ENST00000299543 MYH6P13533 1939 aa15.05■□□□□ -0
CTDP1-202ENST00000299543 CTAGE15A4D2H0 777 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 KLRF2D3W0D1 207 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 PSMA7O14818 248 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 CTAGE8P0CG41 777 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 PCP11498 1178 aaKnown RBP15.04■□□□□ -0
CTDP1-202ENST00000299543 MTIF2P46199 727 aaKnown RBP15.04■□□□□ -0
CTDP1-202ENST00000299543 TRAPPC10P48553 1259 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 EIF6P56537 245 aaKnown RBP15.04■□□□□ -0
CTDP1-202ENST00000299543 CTAGE6Q86UF2 777 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 CTAGE4Q8IX94 777 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 CEP112Q8N8E3 955 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 GDAP1L1Q96MZ0 367 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 ANKRD2Q9GZV1 360 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 TCP11L1Q9NUJ3 509 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
CTDP1-202ENST00000299543 SRGAP2O75044 1071 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 KLK7P49862 253 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 PDE4DQ08499 809 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 HSP90B2PQ58FF3 399 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 EXOC4Q96A65 974 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 CCDC122Q5T0U0 273 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 PNKPQ96T60 521 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 BIN2Q9UBW5 565 aaPredicted RBP15.04■□□□□ -0
CTDP1-202ENST00000299543 PCDHA6Q9UN73 950 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 PCDHA8Q9Y5H6 950 aa15.04■□□□□ -0
CTDP1-202ENST00000299543 CYTH3O43739 400 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 TBC1D8BQ0IIM8 1120 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 NFIXQ14938 502 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 C12orf60Q5U649 245 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 LRRC31Q6UY01 552 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 OR8K1Q8NGG5 319 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 TMEM47Q9BQJ4 181 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 H7C1D1 291 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 PLCG1P19174 1290 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 TXKP42681 527 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 SOGA3Q5TF21 947 aa15.03■□□□□ -0
CTDP1-202ENST00000299543 ECM29Q5VYK3 1845 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms