RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CHADLQ6NUI6 762 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 PRPF38AQ8NAV1 312 aaKnown RBP28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 KIFC2Q96AC6 838 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 AMNQ9BXJ7 453 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 RPAP3Q9H6T3 665 aaPredicted RBP28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 RLFQ13129 1914 aa28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 PRPF40AO75400 957 aaKnown RBP28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 NCLP19338 710 aaKnown RBP28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 GNA11P29992 359 aa28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 EARS2Q5JPH6 523 aaKnown RBP28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 SCAND2PQ9GZW5 306 aaPredicted RBP28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 C6orf50Q9HD87 102 aa28.28■■■□□ 2.12
GTF2A1-201ENST00000298173 SMCHD1A6NHR9 2005 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 CXCL11O14625 94 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 IRF6O14896 467 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 SLF1Q9BQI6 1058 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 ZNF408Q9H9D4 720 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 RCOR1Q9UKL0 485 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 KCNH4Q9UQ05 1017 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 PCDHA1Q9Y5I3 950 aa28.27■■■□□ 2.12
GTF2A1-201ENST00000298173 FIBPO43427 364 aa28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 TOB1P50616 345 aaPredicted RBP28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 FBXO11Q86XK2 927 aa28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 RTEL1Q9NZ71 1219 aa28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 TMOD4Q9NZQ9 345 aa28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 PCDHA6Q9UN73 950 aa28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 PCDHA8Q9Y5H6 950 aa28.26■■■□□ 2.12
GTF2A1-201ENST00000298173 PTMSP20962 102 aa28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 PPIL2Q13356 520 aa28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 LEO1Q8WVC0 666 aaPredicted RBP28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 OTUD5Q96G74 571 aa28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 FTOQ9C0B1 505 aaKnown RBP eCLIP28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 GBA2Q9HCG7 927 aaPredicted RBP28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 POLR3EQ9NVU0 708 aa28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 PPP1R9AQ9ULJ8 1098 aa28.26■■■□□ 2.11
GTF2A1-201ENST00000298173 ELP1O95163 1332 aa28.25■■■□□ 2.11
GTF2A1-201ENST00000298173 NOM1Q5C9Z4 860 aaKnown RBP28.25■■■□□ 2.11
GTF2A1-201ENST00000298173 RILPL1Q5EBL4 403 aa28.25■■■□□ 2.11
GTF2A1-201ENST00000298173 TANGO6Q9C0B7 1094 aa28.25■■■□□ 2.11
GTF2A1-201ENST00000298173 RIC8AQ9NPQ8 531 aa28.25■■■□□ 2.11
GTF2A1-201ENST00000298173 A0A0G2JLL6 359 aaPredicted RBP28.24■■■□□ 2.11
GTF2A1-201ENST00000298173 NASPP49321 788 aaPredicted RBP28.24■■■□□ 2.11
GTF2A1-201ENST00000298173 CATSPERGQ6ZRH7 1159 aa28.24■■■□□ 2.11
GTF2A1-201ENST00000298173 PRRT2Q7Z6L0 340 aaPredicted RBP28.24■■■□□ 2.11
GTF2A1-201ENST00000298173 FAM205CA6NFA0 338 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 FLOT1O75955 427 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 CELF2O95319 508 aaKnown RBP28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 CSPP1Q1MSJ5 1256 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 CST9Q5W186 159 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 BICD2Q8TD16 824 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 OPTNQ96CV9 577 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 SPATA32Q96LK8 384 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 CLIC4Q9Y696 253 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 TRPM7Q96QT4 1865 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 LOC285556D6RIA3 1793 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 TRAF1Q13077 416 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 NBR1Q14596 966 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 ANO1Q5XXA6 986 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 RASGRP4Q8TDF6 673 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 SLC10A4Q96EP9 437 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 ADAMTS5Q9UNA0 930 aa28.23■■■□□ 2.11
GTF2A1-201ENST00000298173 ZNF536O15090 1300 aa28.22■■■□□ 2.11
GTF2A1-201ENST00000298173 ADCY7P51828 1080 aa28.22■■■□□ 2.11
GTF2A1-201ENST00000298173 CEBPZQ03701 1054 aaKnown RBP28.22■■■□□ 2.11
GTF2A1-201ENST00000298173 C2orf69Q8N8R5 385 aa28.22■■■□□ 2.11
GTF2A1-201ENST00000298173 LINC00301Q8NCQ3 95 aa28.22■■■□□ 2.11
GTF2A1-201ENST00000298173 SLC38A10Q9HBR0 1119 aa28.22■■■□□ 2.11
GTF2A1-201ENST00000298173 FDX1P10109 184 aa28.21■■■□□ 2.11
GTF2A1-201ENST00000298173 CLK2P49760 499 aaKnown RBP28.21■■■□□ 2.11
GTF2A1-201ENST00000298173 PIK3AP1Q6ZUJ8 805 aa28.21■■■□□ 2.11
GTF2A1-201ENST00000298173 PROCA1Q8NCQ7 364 aaPredicted RBP28.21■■■□□ 2.11
GTF2A1-201ENST00000298173 PSTPIP2Q9H939 334 aa28.21■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L15C9J2P7 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L13C9JLJ4 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L11C9JVI0 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L18D6R9N7 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L22D6RA61 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L17D6RBQ6 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L19D6RCP7 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L20D6RJB6 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 YEATS4O95619 227 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 DSG3P32926 999 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 GJA5P36382 358 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 MRPL12P52815 198 aaKnown RBP28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 USP17L24Q0WX57 530 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 COG2Q14746 738 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 GLT8D2Q9H1C3 349 aa28.2■■■□□ 2.11
GTF2A1-201ENST00000298173 GADD45BO75293 160 aaPredicted RBP28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 PTPAQ15257 358 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 USH1GQ495M9 461 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 CCDC174Q6PII3 467 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 REXO1Q8N1G1 1221 aaKnown RBP28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 CUL5Q93034 780 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 OPLAHO14841 1288 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 ICAM1P05362 532 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 HOXA7P31268 230 aaPredicted RBP28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 TRAPPC10P48553 1259 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 MOGSQ13724 837 aa28.19■■■□□ 2.1
GTF2A1-201ENST00000298173 SLC39A14Q15043 492 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms