RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 SYNE3Q6ZMZ3 975 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 KRBA2Q6ZNG9 492 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 MKL1Q969V6 931 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 SLC26A6Q9BXS9 759 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 DEFB129Q9H1M3 183 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 DNAJC25Q9H1X3 360 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 CPVLQ9H3G5 476 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.57□□□□□ -1.2
TMC1-201ENST00000297784 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
TMC1-201ENST00000297784 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 STK36Q9NRP7 1315 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 SSC5DA1L4H1 1573 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 PAPPA2Q9BXP8 1791 aa7.57□□□□□ -1.2
TMC1-201ENST00000297784 GOLGA6L19H0YKK7 550 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 CALM1P0DP23 149 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 CALM2P0DP24 149 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 CALM3P0DP25 149 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 PDHBP11177 359 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 EEF2P13639 858 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 ZSCAN26Q16670 478 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 LRRC47Q8N1G4 583 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 NEK11Q8NG66 645 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 LEO1Q8WVC0 666 aaPredicted RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 EXOC4Q96A65 974 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 FZD1Q9UP38 647 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 PHLPP2Q6ZVD8 1323 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 SMCHD1A6NHR9 2005 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 GH2P01242 217 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 NPY5RQ15761 445 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 ARHGAP29Q52LW3 1261 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 CCDC178Q5BJE1 867 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 KIAA1755Q5JYT7 1200 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 NBPF12Q5TAG4 269 aaPredicted RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 ICE2Q659A1 982 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 SRLQ86TD4 932 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 CCDC196A0A1B0GTZ2 297 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 DCAF8L1A6NGE4 600 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 H7C1D1 291 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 MPHOSPH10O00566 681 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 SOCS7O14512 581 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 PRPF3O43395 683 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 SSRP1Q08945 709 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 GPR162Q16538 588 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 STX1AQ16623 288 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 E4F1Q66K89 784 aaPredicted RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 CCDC150Q8NCX0 1101 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 SMARCE1Q969G3 411 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 PPP1R13BQ96KQ4 1090 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 TRERF1Q96PN7 1200 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 ALG1Q9BT22 464 aa7.56□□□□□ -1.2
TMC1-201ENST00000297784 RNF26Q9BY78 433 aaPredicted RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
TMC1-201ENST00000297784 SCN4AP35499 1836 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 GOLGA6L4A6NEF3 574 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 CCP110O43303 1012 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 CDKL5O76039 1030 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 ECE1P42892 770 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
TMC1-201ENST00000297784 SPATA32Q96LK8 384 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 RNF39Q9H2S5 420 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 TADA3O75528 432 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 CAP2P40123 477 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 KRT40Q6A162 431 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 TYW1BQ6NUM6 668 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 TMEM179Q6ZVK1 233 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 GOLGA6L1Q8N7Z2 621 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 C8orf76Q96K31 380 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 GLIS2Q9BZE0 524 aaPredicted RBP7.55□□□□□ -1.2
TMC1-201ENST00000297784 FTOQ9C0B1 505 aaKnown RBP eCLIP7.55□□□□□ -1.2
TMC1-201ENST00000297784 KANSL2Q9H9L4 492 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 TRMT1Q9NXH9 659 aaKnown RBP7.55□□□□□ -1.2
TMC1-201ENST00000297784 NYAP2Q9P242 653 aa7.55□□□□□ -1.2
TMC1-201ENST00000297784 DOCK1Q14185 1865 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 NR1I2O75469 434 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 RPS6KA5O75582 802 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 DEXIO95424 95 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 GTF2A1P52655 376 aaPredicted RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 UBXN4Q92575 508 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 GGA3Q9NZ52 723 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 KCNJ14Q9UNX9 436 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 WDR90Q96KV7 1748 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 OTOFQ9HC10 1997 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 FRMPD2Q68DX3 1309 aaPredicted RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 KLRF2D3W0D1 207 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 H3BQV1 296 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 TBC1D8O95759 1140 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms