RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 TUBB4BP68371 445 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 MECOMQ03112 1051 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 SPATA20Q8TB22 786 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 CEP89Q96ST8 783 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 ADGRG1Q9Y653 693 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 TMTC3Q6ZXV5 915 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 APTXQ7Z2E3 356 aaKnown RBP17.51■□□□□ 0.39
UBAP1-201ENST00000297661 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
UBAP1-201ENST00000297661 ADRA2BP18089 450 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 DDR1Q08345 913 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
UBAP1-201ENST00000297661 RASGRP4Q8TDF6 673 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 A0A1B0GTH6 734 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 CTAGE9A4FU28 777 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 GSCP56915 257 aaPredicted RBP17.5■□□□□ 0.39
UBAP1-201ENST00000297661 NLRP5P59047 1200 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 CUL4BQ13620 913 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 IL17AQ16552 155 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 CT47A1Q5JQC4 288 aaPredicted RBP17.5■□□□□ 0.39
UBAP1-201ENST00000297661 RAD9BQ6WBX8 426 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
UBAP1-201ENST00000297661 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
UBAP1-201ENST00000297661 CTAGE15A4D2H0 777 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 CTAGE8P0CG41 777 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 CTAGE6Q86UF2 777 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 CTAGE4Q8IX94 777 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 TRIML1Q8N9V2 468 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 XDHP47989 1333 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 PPP1R3GB7ZBB8 358 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 AKR1B15C9JRZ8 316 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 SYF2O95926 243 aaKnown RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 TUBB2AQ13885 445 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 TXNRD3Q86VQ6 643 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 CTCFLQ8NI51 663 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 KAT2BQ92831 832 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 TNFRSF25Q93038 417 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 NSUN4Q96CB9 384 aaKnown RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 TUBB2BQ9BVA1 445 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 CXorf56Q9H5V9 222 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 ERLIN2O94905 339 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 ERCC5P28715 1186 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 NOA1Q8NC60 698 aaKnown RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 SETDB2Q96T68 719 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 MTRQ99707 1265 aa17.49■□□□□ 0.39
UBAP1-201ENST00000297661 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-201ENST00000297661 CASP14P31944 242 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 PPFIBP1Q86W92 1011 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 SLC35F6Q8N357 371 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 PLIN2Q99541 437 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 MTA3Q9BTC8 594 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 BSDC1Q9NW68 430 aaPredicted RBP17.48■□□□□ 0.39
UBAP1-201ENST00000297661 DUOX1Q9NRD9 1551 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 MYH13Q9UKX3 1938 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 TSPY2A6NKD2 308 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 PRPF6O94906 941 aaKnown RBP17.48■□□□□ 0.39
UBAP1-201ENST00000297661 ABL1P00519 1130 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 USP17L8P0C7I0 530 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 LIG3P49916 1009 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 RCAN1P53805 252 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 RRAGBQ5VZM2 374 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 FAM107BQ9H098 131 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 VPS16Q9H269 839 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
UBAP1-201ENST00000297661 TUBBP07437 444 aa17.47■□□□□ 0.39
UBAP1-201ENST00000297661 FXR1P51114 621 aaKnown RBP eCLIP17.47■□□□□ 0.39
UBAP1-201ENST00000297661 PANX2Q96RD6 677 aa17.47■□□□□ 0.39
UBAP1-201ENST00000297661 ADD3Q9UEY8 706 aaKnown RBP17.47■□□□□ 0.39
UBAP1-201ENST00000297661 RNF225M0QZC1 329 aaPredicted RBP17.47■□□□□ 0.39
UBAP1-201ENST00000297661 CCDC172P0C7W6 258 aa17.47■□□□□ 0.39
UBAP1-201ENST00000297661 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
UBAP1-201ENST00000297661 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
UBAP1-201ENST00000297661 PP2D1A8MPX8 630 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 SCG2P13521 617 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 AARSP49588 968 aaKnown RBP eCLIP17.46■□□□□ 0.39
UBAP1-201ENST00000297661 WHAMMP3Q1A5X7 153 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 FERMT2Q96AC1 680 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 EEF2KMTQ96G04 330 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 MAP2K2P36507 400 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 MNAT1P51948 309 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 ATP2C1P98194 919 aaPredicted RBP17.46■□□□□ 0.39
UBAP1-201ENST00000297661 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
UBAP1-201ENST00000297661 STAG2Q8N3U4 1231 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 VIPAS39Q9H9C1 493 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 TAB2Q9NYJ8 693 aa17.46■□□□□ 0.39
UBAP1-201ENST00000297661 FAM205AQ6ZU69 1335 aa17.46■□□□□ 0.38
UBAP1-201ENST00000297661 CDKAL1Q5VV42 579 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 WDR93Q6P2C0 686 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 RASGRP2Q7LDG7 609 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 NLGN1Q8N2Q7 840 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms