RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 ARFGEF1Q9Y6D6 1849 aa15.47■□□□□ 0.07
CHMP4C-201ENST00000297265 F5H6K3 240 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 GOLGA6L19H0YKK7 550 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 WNT10BO00744 389 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 POLD1P28340 1107 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 CDC25AP30304 524 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 CLK2P49760 499 aaKnown RBP15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 PRELPP51888 382 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 ICA1Q05084 483 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 KLRC3Q07444 240 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 R3HDM1Q15032 1099 aaKnown RBP15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 FKBP1CQ5VVH2 108 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 KRT25Q7Z3Z0 450 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 DHX58Q96C10 678 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 MTRQ99707 1265 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 HERC5Q9UII4 1024 aaKnown RBP15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 MAN1B1Q9UKM7 699 aa15.46■□□□□ 0.07
CHMP4C-201ENST00000297265 BECN2A8MW95 431 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 ZBTB5O15062 677 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 PTGER2P43116 358 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 NONOQ15233 471 aaKnown RBP eCLIP15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 NBPF9Q3BBW0 867 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 SLFN13Q68D06 897 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 GMCL1P1Q8NEA9 526 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 DCAF4Q8WV16 495 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 PAGE5Q96GU1 130 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 TRIM5Q9C035 493 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.06
CHMP4C-201ENST00000297265 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 SLC1A4P43007 532 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 MORC3Q14149 939 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 JAKMIP3Q5VZ66 844 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 KANK3Q6NY19 840 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 REXO1Q8N1G1 1221 aaKnown RBP15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 TBCKQ8TEA7 893 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 TRIM34Q9BYJ4 488 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 TMEM39BQ9GZU3 492 aa15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHMP4C-201ENST00000297265 IKBKBO14920 756 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 EGFRP00533 1210 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 CASP1P29466 404 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 MAP3K10Q02779 954 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 CIAPIN1Q6FI81 312 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 PDXDC2PQ6P474 469 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 NEK8Q86SG6 692 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 SPC24Q8NBT2 197 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 MED15Q96RN5 788 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 TTC12Q9H892 705 aaPredicted RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 RIC8AQ9NPQ8 531 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 TMOD2Q9NZR1 351 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 NRBP1Q9UHY1 535 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 ZNF500O60304 480 aaPredicted RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 NDUFB10O96000 172 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 PRPHP41219 470 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 DPYDQ12882 1025 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 ZRSR1Q15695 479 aaKnown RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 LETM2Q2VYF4 491 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 KIAA1755Q5JYT7 1200 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 MRFAP1L1Q96HT8 127 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 NUP88Q99567 741 aaPredicted RBP15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 CD2APQ9Y5K6 639 aa15.44■□□□□ 0.06
CHMP4C-201ENST00000297265 PP2D1A8MPX8 630 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 LAD1O00515 517 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 TBC1D12O60347 775 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 CDC25BP30305 580 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 ECE1P42892 770 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 AFMP43652 599 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 ADCY7P51828 1080 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 NAALADL2Q58DX5 795 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 PPP1R18Q6NYC8 613 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 DTHD1Q6ZMT9 781 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 LRRC15Q8TF66 581 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 MYOZ2Q9NPC6 264 aa15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 PPP1R1BQ9UD71 204 aaPredicted RBP15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 HOOK1Q9UJC3 728 aaKnown RBP15.43■□□□□ 0.06
CHMP4C-201ENST00000297265 ZNF280AP59817 542 aaPredicted RBP15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 SMARCE1Q969G3 411 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 MTMR9Q96QG7 549 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 VEZTQ9HBM0 779 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 MSNP26038 577 aaKnown RBP15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 UBE2SQ16763 222 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 CCDC144BQ3MJ40 725 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 BTNL9Q6UXG8 535 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 TRIML1Q8N9V2 468 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 ACER1Q8TDN7 264 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 JDP2Q8WYK2 163 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 STAMQ92783 540 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 SYNPO2Q9UMS6 1093 aa15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
CHMP4C-201ENST00000297265 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms