RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 KCNJ6P48051 423 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 DNA2P51530 1060 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 RTFDC1Q9BY42 306 aaPredicted RBP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 IRX2Q9BZI1 471 aaPredicted RBP10.49□□□□□ -0.73
PRDM9-201ENST00000296682 SLC39A2Q9NP94 309 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 ROBO3Q96MS0 1386 aa10.49□□□□□ -0.73
PRDM9-201ENST00000296682 GNA11P29992 359 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 ZNF76P36508 570 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 MTIF2P46199 727 aaKnown RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 CCZ1BP86790 482 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 CCZ1P86791 482 aaPredicted RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 STIM1Q13586 685 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 AOC3Q16853 763 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 CABP7Q86V35 215 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 TBC1D22AQ8WUA7 517 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 PKD2L1Q9P0L9 805 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 PSME4Q14997 1843 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L15C9J2P7 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L13C9JLJ4 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L11C9JVI0 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L18D6R9N7 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L22D6RA61 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L17D6RBQ6 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L19D6RCP7 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L20D6RJB6 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 BMP15O95972 392 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 LRRC41Q15345 812 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 NT5DC1Q5TFE4 455 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L6PQ6QN14 398 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 C15orf52Q6ZUT6 534 aaKnown RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 PDCL3Q9H2J4 239 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 DDX4Q9NQI0 724 aaKnown RBP10.48□□□□□ -0.73
PRDM9-201ENST00000296682 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 TUBE1Q9UJT0 475 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 UBXN2AP68543 259 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 FUT2Q10981 343 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 ELF2Q15723 593 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 TEX35Q5T0J7 233 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 SPECC1LQ69YQ0 1117 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 MIGA2Q7L4E1 593 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 CALML4Q96GE6 196 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 LRWD1Q9UFC0 647 aa10.48□□□□□ -0.73
PRDM9-201ENST00000296682 POTEMA6NI47 508 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 RPN1P04843 607 aaKnown RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 ARHGAP29Q52LW3 1261 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 CCDC12Q8WUD4 166 aaPredicted RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 EPC1Q9H2F5 836 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 EXOC1Q9NV70 894 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 PCDHA6Q9UN73 950 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 PCDHA8Q9Y5H6 950 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 SOWAHDA6NJG2 315 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 MYO1BO43795 1136 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 TDP2O95551 362 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 CASP14P31944 242 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 NAP1L1P55209 391 aaKnown RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 E4F1Q66K89 784 aaPredicted RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 CCDC84Q86UT8 332 aaPredicted RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 PPP1R13BQ96KQ4 1090 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 POLRMTO00411 1230 aaKnown RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 IKBKBO14920 756 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 RBL2Q08999 1139 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 PAK1Q13153 545 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 ERCC6LQ2NKX8 1250 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 PROM2Q8N271 834 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 CERS5Q8N5B7 392 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 HINFPQ9BQA5 517 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
PRDM9-201ENST00000296682 BRWD3Q6RI45 1802 aa10.47□□□□□ -0.73
PRDM9-201ENST00000296682 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
PRDM9-201ENST00000296682 CLSTN1O94985 981 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 PLCG1P19174 1290 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 SLC30A10Q6XR72 485 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 POTEDQ86YR6 584 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 SPATA20Q8TB22 786 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.73
PRDM9-201ENST00000296682 ADCY7P51828 1080 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 ATP2C1P98194 919 aaPredicted RBP10.46□□□□□ -0.73
PRDM9-201ENST00000296682 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
PRDM9-201ENST00000296682 GRM4Q14833 912 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 SEPT2Q15019 361 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 IL17AQ16552 155 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 CALCRLQ16602 461 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 CERKLQ49MI3 558 aaPredicted RBP10.46□□□□□ -0.73
PRDM9-201ENST00000296682 NEK8Q86SG6 692 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 NELFCDQ8IXH7 590 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 SNX29Q8TEQ0 813 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 UBXN4Q92575 508 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 HSD3B7Q9H2F3 369 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.73
PRDM9-201ENST00000296682 GPR75-ASB3A0A0A6YYF3 556 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 AKR1B15C9JRZ8 316 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms