RNA–Protein interactions for RNA: ENST00000294072.8

CYB561A3-201, Transcript of cytochrome b561 family member A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561A3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-201ENST00000294072 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 ZNF70Q9UC06 446 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 ANKRD65E5RJM6 399 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 MPHOSPH10O00566 681 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 SMC2O95347 1197 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 ZRSR1Q15695 479 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 DDAH1O94760 285 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 TPM1P09493 284 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 SATB1Q01826 763 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 MMS22LQ6ZRQ5 1243 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 CARD6Q9BX69 1037 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 DNAI1Q9UI46 699 aa12.14□□□□□ -0.47
CYB561A3-201ENST00000294072 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 KIF28PB7ZC32 967 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 WNT10BO00744 389 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 URI1O94763 535 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 SDF4Q9BRK5 362 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 FUT8Q9BYC5 575 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 CPVLQ9H3G5 476 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 KINO60870 393 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 CAVIN2O95810 425 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 GMPSP49915 693 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 FUT2Q10981 343 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 ARFGAP3Q9NP61 516 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 MYOZ2Q9NPC6 264 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
CYB561A3-201ENST00000294072 RCAN1P53805 252 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 GSDMDP57764 484 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TNIP1Q15025 636 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 KRT40Q6A162 431 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TMEM39BQ9GZU3 492 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 KCNJ14Q9UNX9 436 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 ASTN2O75129 1339 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 FZD9O00144 591 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 GDF11O95390 407 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 CALM1P0DP23 149 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 CALM2P0DP24 149 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 CALM3P0DP25 149 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 MAP2K2P36507 400 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TMTC3Q6ZXV5 915 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 MED4Q9NPJ6 270 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 SWAP70Q9UH65 585 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TUBB4AP04350 444 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 TMC6Q7Z403 805 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 ANKS1AQ92625 1134 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
CYB561A3-201ENST00000294072 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 ENTPD3O75355 529 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 CPP00450 1065 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 PKN1Q16512 942 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 TBC1D10BQ4KMP7 808 aaPredicted RBP12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 EGFL6Q8IUX8 553 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 FSIP1Q8NA03 581 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 EHD4Q9H223 541 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 RBM28Q9NW13 759 aaKnown RBP12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 VPS18Q9P253 973 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 STK38Q15208 465 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 VPS54Q9P1Q0 977 aa12.11□□□□□ -0.47
CYB561A3-201ENST00000294072 DEXIO95424 95 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms