RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 FAM237AA0A1B0GTK4 181 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 TMEM88BA6NKF7 163 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 MAP3K10Q02779 954 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 DHX40Q8IX18 779 aaKnown RBP19.16■□□□□ 0.66
CPSF4-201ENST00000292476 DCAF4Q8WV16 495 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 SDF4Q9BRK5 362 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
CPSF4-201ENST00000292476 MYH6P13533 1939 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 EEF2P13639 858 aaKnown RBP19.15■□□□□ 0.66
CPSF4-201ENST00000292476 NDUFA8P51970 172 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 AXDND1Q5T1B0 1012 aaPredicted RBP19.15■□□□□ 0.66
CPSF4-201ENST00000292476 USP17L2Q6R6M4 530 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 APOBEC3FQ8IUX4 373 aaKnown RBP19.15■□□□□ 0.66
CPSF4-201ENST00000292476 LRRC47Q8N1G4 583 aaKnown RBP19.15■□□□□ 0.66
CPSF4-201ENST00000292476 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 ARHGEF10LQ9HCE6 1279 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 CREBZFQ9NS37 354 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 VPS54Q9P1Q0 977 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 KCNJ14Q9UNX9 436 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 MTMR7Q9Y216 660 aa19.15■□□□□ 0.66
CPSF4-201ENST00000292476 FAM196BA6NMK8 535 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 USP17L5A8MUK1 530 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 KIF28PB7ZC32 967 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 CELF2O95319 508 aaKnown RBP19.14■□□□□ 0.66
CPSF4-201ENST00000292476 NLRP5P59047 1200 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 RASA3Q14644 834 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 ZRSR1Q15695 479 aaKnown RBP19.14■□□□□ 0.66
CPSF4-201ENST00000292476 GLIPR1L2Q4G1C9 344 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 CST9Q5W186 159 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 RIOX1Q9H6W3 641 aa19.14■□□□□ 0.66
CPSF4-201ENST00000292476 BTBD18B2RXH4 712 aa19.14■□□□□ 0.65
CPSF4-201ENST00000292476 GH2P01242 217 aa19.14■□□□□ 0.65
CPSF4-201ENST00000292476 ZNF543Q08ER8 600 aa19.14■□□□□ 0.65
CPSF4-201ENST00000292476 SEPT2Q15019 361 aa19.14■□□□□ 0.65
CPSF4-201ENST00000292476 SH2D4AQ9H788 454 aa19.14■□□□□ 0.65
CPSF4-201ENST00000292476 CEP131Q9UPN4 1083 aa19.14■□□□□ 0.65
CPSF4-201ENST00000292476 A0A1B0GVL5 298 aa19.13■□□□□ 0.65
CPSF4-201ENST00000292476 UBE2Q2LH0YL09 131 aa19.13■□□□□ 0.65
CPSF4-201ENST00000292476 GDF11O95390 407 aa19.13■□□□□ 0.65
CPSF4-201ENST00000292476 GOLGA8HP0CJ92 632 aa19.13■□□□□ 0.65
CPSF4-201ENST00000292476 C17orf53Q8N3J3 647 aaPredicted RBP19.13■□□□□ 0.65
CPSF4-201ENST00000292476 BARHL2Q9NY43 387 aa19.13■□□□□ 0.65
CPSF4-201ENST00000292476 PPP2R3BQ9Y5P8 575 aa19.13■□□□□ 0.65
CPSF4-201ENST00000292476 PITPNM2Q9BZ72 1349 aa19.12■□□□□ 0.65
CPSF4-201ENST00000292476 ZNF202O95125 648 aa19.12■□□□□ 0.65
CPSF4-201ENST00000292476 ELOA2Q8IYF1 753 aaPredicted RBP19.12■□□□□ 0.65
CPSF4-201ENST00000292476 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.12■□□□□ 0.65
CPSF4-201ENST00000292476 IMPACTQ9P2X3 320 aa19.12■□□□□ 0.65
CPSF4-201ENST00000292476 ABT1Q9ULW3 272 aaKnown RBP19.12■□□□□ 0.65
CPSF4-201ENST00000292476 hCG_1642624A0A1W2PR95 340 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 CYTH3O43739 400 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 ASNSP08243 561 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 SLC1A4P43007 532 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 GSDMDP57764 484 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 NLRP12P59046 1061 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 TPM4P67936 248 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 CCDC96Q2M329 555 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 PRAMEF18Q5VWM3 479 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 DCAF15Q66K64 600 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 SLFN13Q68D06 897 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 DNAJC5GQ8N7S2 189 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 GMCL1Q96IK5 515 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 HPSEQ9Y251 543 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 SMTNL1A8MU46 457 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 BMP15O95972 392 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 PFKFB1P16118 471 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 GNA11P29992 359 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 CAP2P40123 477 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 PTPAQ15257 358 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 CDCA5Q96FF9 252 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 DEFB129Q9H1M3 183 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 GOPCQ9HD26 462 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 KCND1Q9NSA2 647 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 ZBTB21Q9ULJ3 1066 aa19.11■□□□□ 0.65
CPSF4-201ENST00000292476 CUTAO60888 179 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 TRAPPC10P48553 1259 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 HEATR3Q7Z4Q2 680 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 AOPEPQ8N6M6 819 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 DAGLBQ8NCG7 672 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 NRBP1Q9UHY1 535 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 PCDHA4Q9UN74 947 aa19.1■□□□□ 0.65
CPSF4-201ENST00000292476 FRMPD2Q68DX3 1309 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-201ENST00000292476 F5H6K3 240 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 IKBKBO14920 756 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 KLRC3Q07444 240 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 CLEC10AQ8IUN9 316 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 LRRC8AQ8IWT6 810 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 BLIDQ8IZY5 108 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 CACTINQ8WUQ7 758 aaKnown RBP19.09■□□□□ 0.65
CPSF4-201ENST00000292476 KLRG1Q96E93 195 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 TEPSINQ96N21 525 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 C6orf50Q9HD87 102 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 GPCPD1Q9NPB8 672 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 FAM13BQ9NYF5 915 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 MORC2Q9Y6X9 1032 aaPredicted RBP19.09■□□□□ 0.65
CPSF4-201ENST00000292476 MYH4Q9Y623 1939 aa19.09■□□□□ 0.65
CPSF4-201ENST00000292476 PNMA6FA0A0J9YX94 578 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 ESYT2A0FGR8 921 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms