RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
SNF8-201ENST00000290330 LRRC41Q15345 812 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
SNF8-201ENST00000290330 TBC1D10CQ8IV04 446 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 FGD4Q96M96 766 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 TMEM47Q9BQJ4 181 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 MTMR7Q9Y216 660 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
SNF8-201ENST00000290330 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
SNF8-201ENST00000290330 TRIOBPQ9H2D6 2365 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 KBTBD13C9JR72 458 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 ZNF213O14771 459 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
SNF8-201ENST00000290330 RARBP10826 455 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 AKR1A1P14550 325 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 MAGEA10P43363 369 aaPredicted RBP12.34□□□□□ -0.43
SNF8-201ENST00000290330 SNAP25P60880 206 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 IRX6P78412 446 aaPredicted RBP12.34□□□□□ -0.43
SNF8-201ENST00000290330 TTBK2Q6IQ55 1244 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 TTC14Q96N46 770 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
SNF8-201ENST00000290330 ACAD9Q9H845 621 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
SNF8-201ENST00000290330 PGK1P00558 417 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 ADCYAP1R1P41586 468 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 TKFCQ3LXA3 575 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 SLC39A5Q6ZMH5 540 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 ESR2Q92731 530 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 DSCC1Q9BVC3 393 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
SNF8-201ENST00000290330 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.33□□□□□ -0.44
SNF8-201ENST00000290330 NEDD4P46934 1319 aa12.33□□□□□ -0.44
SNF8-201ENST00000290330 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 PDHBP11177 359 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 ALAS1P13196 640 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 GSPT1P15170 499 aaKnown RBP12.32□□□□□ -0.44
SNF8-201ENST00000290330 SLC16A2P36021 539 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 RTP1P59025 263 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 SNX17Q15036 470 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 ARMCX2Q7L311 632 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 RNF180Q86T96 592 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 FAM133AQ8N9E0 248 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 LENG1Q96BZ8 264 aaPredicted RBP12.32□□□□□ -0.44
SNF8-201ENST00000290330 IL25Q9H293 177 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
SNF8-201ENST00000290330 ABHD16BQ9H3Z7 469 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
SNF8-201ENST00000290330 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
SNF8-201ENST00000290330 RANBP2P49792 3224 aaKnown RBP12.32□□□□□ -0.44
SNF8-201ENST00000290330 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
SNF8-201ENST00000290330 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 KDM4AO75164 1064 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 ICAM1P05362 532 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 SNHG28P0DPA3 235 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 NT5C2P49902 561 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 SYDE2Q5VT97 1194 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 UBE2OQ9C0C9 1292 aaKnown RBP12.31□□□□□ -0.44
SNF8-201ENST00000290330 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 CCPG1Q9ULG6 757 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 ATP11BQ9Y2G3 1177 aa12.31□□□□□ -0.44
SNF8-201ENST00000290330 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 SOX1O00570 391 aaPredicted RBP12.3□□□□□ -0.44
SNF8-201ENST00000290330 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
SNF8-201ENST00000290330 MDM2Q00987 491 aaPredicted RBP12.3□□□□□ -0.44
SNF8-201ENST00000290330 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 IMMTQ16891 758 aaKnown RBP12.3□□□□□ -0.44
SNF8-201ENST00000290330 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 ZSWIM5Q9P217 1185 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
SNF8-201ENST00000290330 ASB14A6NK59 587 aa12.29□□□□□ -0.44
SNF8-201ENST00000290330 B4E1Z4 1266 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms