RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SYNGAP1Q96PV0 1343 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 DNAH12Q6ZR08 3092 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 COL6A3P12111 3177 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 A0A1W2PQ45 241 aaPredicted RBP18■□□□□ 0.47
PDE6D-201ENST00000287600 A0A1W2PQY0 241 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 TSPY3P0CV98 308 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 TSPY8P0CW00 308 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 CHMLP26374 656 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 TLE2Q04725 743 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 SH3RF1Q7Z6J0 888 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
PDE6D-201ENST00000287600 FAM161BQ96MY7 647 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 RAVER2Q9HCJ3 691 aaKnown RBP18■□□□□ 0.47
PDE6D-201ENST00000287600 MTMR4Q9NYA4 1195 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 FEM1BQ9UK73 627 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 SYNPO2Q9UMS6 1093 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 RIPK3Q9Y572 518 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 PLIN4Q96Q06 1357 aa18■□□□□ 0.47
PDE6D-201ENST00000287600 TRIM43BA6NCK2 446 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 PQBP1O60828 265 aaKnown RBP17.99■□□□□ 0.47
PDE6D-201ENST00000287600 CLTBP09497 229 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 SHHQ15465 462 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 FAM109BQ6ICB4 259 aaPredicted RBP17.99■□□□□ 0.47
PDE6D-201ENST00000287600 GMCL1P1Q8NEA9 526 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 TRIM43Q96BQ3 446 aaPredicted RBP17.99■□□□□ 0.47
PDE6D-201ENST00000287600 INCENPQ9NQS7 918 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 ANAPC4Q9UJX5 808 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
PDE6D-201ENST00000287600 SYNRGQ9UMZ2 1314 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 ADAMTS4O75173 837 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 SLFN13Q68D06 897 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 ANKRD35Q8N283 1001 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 RUFY2Q8WXA3 655 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 MKL1Q969V6 931 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 IL25Q9H293 177 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 STARD7Q9NQZ5 370 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 FBXO40Q9UH90 709 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 TACC3Q9Y6A5 838 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 MCM3APO60318 1980 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
PDE6D-201ENST00000287600 DNAJC25-GNG10A0A024R161 153 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 SNAI1O95863 264 aaPredicted RBP17.97■□□□□ 0.47
PDE6D-201ENST00000287600 BMP3P12645 472 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 HAND2P61296 217 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 TFAP4Q01664 338 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
PDE6D-201ENST00000287600 MAMDC4Q6UXC1 1216 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 NEDD1Q8NHV4 660 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 GUCD1Q96NT3 240 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 HOMER2Q9NSB8 354 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
PDE6D-201ENST00000287600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDE6D-201ENST00000287600 RAG1P15918 1043 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 STAT2P52630 851 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 ACLYP53396 1101 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 OAZ1P54368 228 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 ZNF467Q7Z7K2 595 aaPredicted RBP17.96■□□□□ 0.47
PDE6D-201ENST00000287600 CHST13Q8NET6 341 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
PDE6D-201ENST00000287600 DSCC1Q9BVC3 393 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
PDE6D-201ENST00000287600 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.96■□□□□ 0.47
PDE6D-201ENST00000287600 RAD50Q92878 1312 aa17.96■□□□□ 0.46
PDE6D-201ENST00000287600 MOXD2PA6NHM9 499 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 ZNF213O14771 459 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 RANBP6O60518 1105 aaKnown RBP17.95■□□□□ 0.46
PDE6D-201ENST00000287600 SLC1A4P43007 532 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 BMP2KLQ5H9B9 411 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDE6D-201ENST00000287600 TMEM39AQ9NV64 488 aa17.95■□□□□ 0.46
PDE6D-201ENST00000287600 MYADML2A6NDP7 307 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 TSPY2A6NKD2 308 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 KIAA0355O15063 1070 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 ORC4O43929 436 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
PDE6D-201ENST00000287600 FGRP09769 529 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 C6orf222P0C671 652 aaPredicted RBP17.94■□□□□ 0.46
PDE6D-201ENST00000287600 ITGB8P26012 769 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 KCNA10Q16322 511 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 RRP12Q5JTH9 1297 aaKnown RBP17.94■□□□□ 0.46
PDE6D-201ENST00000287600 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 ARMCX2Q7L311 632 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 KLHDC9Q8NEP7 349 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 CHMP4CQ96CF2 233 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
PDE6D-201ENST00000287600 ABHD16BQ9H3Z7 469 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 ACAD9Q9H845 621 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 SPC25Q9HBM1 224 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 CTNNA3Q9UI47 895 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 STX8Q9UNK0 236 aa17.94■□□□□ 0.46
PDE6D-201ENST00000287600 LRRC37A2A6NM11 1700 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms