RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 CYP2C18P33260 490 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 GJA9P57773 515 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 KLRC3Q07444 240 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 GNASQ5JWF2 1037 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 AKNAD1Q5T1N1 836 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 PSRC1Q6PGN9 363 aaPredicted RBP12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ARMCX2Q7L311 632 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 SIRT2Q8IXJ6 389 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ADAMTS19Q8TE59 1207 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 UPF3AQ9H1J1 476 aaKnown RBP12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 SPC25Q9HBM1 224 aa12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 CXXC1Q9P0U4 656 aaPredicted RBP12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 ARPP21Q9UBL0 812 aaPredicted RBP12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
NSMCE2-201ENST00000287437 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 ATP2A1O14983 1001 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 CTAGE5O15320 804 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 TLR3O15455 904 aaKnown RBP12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 ZBED4O75132 1171 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 IGFBP4P22692 258 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 BEX3Q00994 111 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 UMODL1Q5DID0 1318 aa12.86□□□□□ -0.35
NSMCE2-201ENST00000287437 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 HMMRO75330 724 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 CD4P01730 458 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 RAB30Q15771 203 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 HERVK_113Q902F9 699 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 KATNBL1Q9H079 304 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 SLC38A10Q9HBR0 1119 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
NSMCE2-201ENST00000287437 XIRP2A4UGR9 3374 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 PTGS1P23219 599 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 OTOP2Q7RTS6 562 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 CHST13Q8NET6 341 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 STRBPQ96SI9 672 aaKnown RBP12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 UHRF1Q96T88 793 aaPredicted RBP12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 ASTN1O14525 1302 aa12.84□□□□□ -0.35
NSMCE2-201ENST00000287437 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 PRDM1O75626 825 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 FGBP02675 491 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 CCL23P55773 120 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 TNFAIP2Q03169 654 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 LRRC47Q8N1G4 583 aaKnown RBP12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 MTIF3Q9H2K0 278 aaKnown RBP12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 FEM1BQ9UK73 627 aa12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 DDX49Q9Y6V7 483 aaKnown RBP12.83□□□□□ -0.36
NSMCE2-201ENST00000287437 MCM3APO60318 1980 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 RABGGTBP53611 331 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 OAZ1P54368 228 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 NKX3-2P78367 333 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 ITGA7Q13683 1181 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 SLC43A3Q8NBI5 491 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 NECAB3Q96P71 396 aaPredicted RBP12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 ACAD9Q9H845 621 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 EPB41L4AQ9HCS5 686 aaPredicted RBP12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 ZBTB40Q9NUA8 1239 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 ISY1Q9ULR0 285 aaKnown RBP12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 GNEQ9Y223 722 aaKnown RBP12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 GRIN2DO15399 1336 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 MYH7P12883 1935 aa12.82□□□□□ -0.36
NSMCE2-201ENST00000287437 REV3LO60673 3130 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms