RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NAPAP54920 295 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 NLRP5P59047 1200 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 KIF23Q02241 960 aaPredicted RBP21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 RESTQ13127 1097 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 COG2Q14746 738 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 TREML2Q5T2D2 321 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 SAMD1Q6SPF0 538 aaPredicted RBP21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 GADL1Q6ZQY3 521 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 FASTKD5Q7L8L6 764 aaKnown RBP21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 COA7Q96BR5 231 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 AMNQ9BXJ7 453 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 ATP6V1DQ9Y5K8 247 aa21.76■■□□□ 1.07
PDLIM3-202ENST00000284770 ZBTB48P10074 688 aaPredicted RBP21.75■■□□□ 1.07
PDLIM3-202ENST00000284770 CALML3P27482 149 aa21.75■■□□□ 1.07
PDLIM3-202ENST00000284770 MOGSQ13724 837 aa21.75■■□□□ 1.07
PDLIM3-202ENST00000284770 FBXO11Q86XK2 927 aa21.75■■□□□ 1.07
PDLIM3-202ENST00000284770 DIS3L2Q8IYB7 885 aaKnown RBP21.75■■□□□ 1.07
PDLIM3-202ENST00000284770 ZMYND12Q9H0C1 365 aa21.75■■□□□ 1.07
PDLIM3-202ENST00000284770 FDX1P10109 184 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 U2AF2P26368 475 aaKnown RBP eCLIP21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 HOXA7P31268 230 aaPredicted RBP21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 FSTL1Q12841 308 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 NPY5RQ15761 445 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 SPRYD7Q5W111 196 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 GALNT17Q6IS24 598 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 PPP1R18Q6NYC8 613 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 FOXP1Q9H334 677 aaPredicted RBP21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 LOC285556D6RIA3 1793 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 ESYT2A0FGR8 921 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 DDX11L8A8MPP1 907 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 BTBD18B2RXH4 712 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 DSG3P32926 999 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 KRT2P35908 639 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 GTF2A2P52657 109 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 TRAF1Q13077 416 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 GNL2Q13823 731 aaKnown RBP21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 SLC38A10Q9HBR0 1119 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 BRMS1Q9HCU9 246 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 HOXC10Q9NYD6 342 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 ADAMTS5Q9UNA0 930 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
PDLIM3-202ENST00000284770 MYPNQ86TC9 1320 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 SMCO2A6NFE2 343 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 KIF28PB7ZC32 967 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 BRAPQ7Z569 592 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 MS4A4AQ96JQ5 239 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 PCDHA4Q9UN74 947 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 TLL2Q9Y6L7 1015 aa21.73■■□□□ 1.07
PDLIM3-202ENST00000284770 VWA5AO00534 786 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 CETPP11597 493 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 GNA11P29992 359 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 CCDC174Q6PII3 467 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 DAGLBQ8NCG7 672 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 OXER1Q8TDS5 423 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 ATG4CQ96DT6 458 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 C6orf50Q9HD87 102 aa21.72■■□□□ 1.07
PDLIM3-202ENST00000284770 ZBED4O75132 1171 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 ZNF157P51786 506 aaPredicted RBP21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 RGMBQ6NW40 437 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 BLIDQ8IZY5 108 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 ZNF536O15090 1300 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 TMEM88BA6NKF7 163 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 ICAM1P05362 532 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 MKRN3Q13064 507 aaKnown RBP21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 NR5A1Q13285 461 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 PABPC4Q13310 644 aaKnown RBP eCLIP21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 FOXD4L6Q3SYB3 417 aaPredicted RBP21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 USH1GQ495M9 461 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 GPAT2Q6NUI2 795 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 FOXD4L3Q6VB84 417 aaPredicted RBP21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 NOSTRINQ8IVI9 506 aa21.71■■□□□ 1.07
PDLIM3-202ENST00000284770 SPDYE16A6NNV3 312 aaPredicted RBP21.7■■□□□ 1.06
PDLIM3-202ENST00000284770 FAM173BQ6P4H8 233 aa21.7■■□□□ 1.06
PDLIM3-202ENST00000284770 RASAL3Q86YV0 1011 aa21.7■■□□□ 1.06
PDLIM3-202ENST00000284770 CTDP1Q9Y5B0 961 aaPredicted RBP21.7■■□□□ 1.06
PDLIM3-202ENST00000284770 RLFQ13129 1914 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 PARP14Q460N5 1801 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 CCL15-CCL14A0A0B4J2E2 113 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 GOLGA6L22H0YM25 854 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 IRX3P78415 501 aaPredicted RBP21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 CCL15Q16663 113 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 BICD2Q8TD16 824 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 TNFRSF25Q93038 417 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 RIC8AQ9NPQ8 531 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 PNMA2Q9UL42 364 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 M0R2N6 131 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 ADAMTS3O15072 1205 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 ADCY7P51828 1080 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 REPS2Q8NFH8 660 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 AGBL1Q96MI9 1066 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 ANP32EQ9BTT0 268 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 GLT8D2Q9H1C3 349 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 ASCC2Q9H1I8 757 aaPredicted RBP21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 PSTPIP2Q9H939 334 aa21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 ABT1Q9ULW3 272 aaKnown RBP21.69■■□□□ 1.06
PDLIM3-202ENST00000284770 MRPL12P52815 198 aaKnown RBP21.68■■□□□ 1.06
PDLIM3-202ENST00000284770 OAZ1P54368 228 aa21.68■■□□□ 1.06
PDLIM3-202ENST00000284770 DNM1Q05193 864 aaKnown RBP21.68■■□□□ 1.06
PDLIM3-202ENST00000284770 CPXCR1Q8N123 301 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms