RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SPECC1LQ69YQ0 1117 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 CC2D1AQ6P1N0 951 aaPredicted RBP20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 PDILTQ8N807 584 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 TRIM75PA6NK02 468 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 CCDC178Q5BJE1 867 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 STRIP1Q5VSL9 837 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 RSRC2Q7L4I2 434 aaKnown RBP20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 CSRNP2Q9H175 543 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 VAT1LQ9HCJ6 419 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 BRMS1Q9HCU9 246 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 SERPINB13Q9UIV8 391 aa20.7■□□□□ 0.9
PDLIM3-201ENST00000284767 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 BMP6P22004 513 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 PPP2R3AQ06190 1150 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 MLKLQ8NB16 471 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 UBA5Q9GZZ9 404 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 FRMPD2Q68DX3 1309 aaPredicted RBP20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 YDJCA8MPS7 323 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 ZNF18P17022 549 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 NT5DC1Q5TFE4 455 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 TC2NQ8N9U0 490 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 RABGGTAQ92696 567 aa20.69■□□□□ 0.9
PDLIM3-201ENST00000284767 SEC31AO94979 1220 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 SHMT1P34896 483 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 ENOX1Q8TC92 643 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 WDR24Q96S15 920 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 JAKMIP3Q5VZ66 844 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 TXLNBQ8N3L3 684 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 KIFC2Q96AC6 838 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 MTMR4Q9NYA4 1195 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 MAN1B1Q9UKM7 699 aa20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 SRPRBQ9Y5M8 271 aaKnown RBP20.68■□□□□ 0.9
PDLIM3-201ENST00000284767 POLR2DO15514 142 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 PPIP5K2O43314 1243 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 PARP1P09874 1014 aaKnown RBP20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 TTC38Q5R3I4 469 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 FAM177A1Q8N128 213 aaPredicted RBP20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 TRIML1Q8N9V2 468 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 EPSTI1Q96J88 318 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 ZDHHC15Q96MV8 337 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 DDTLA6NHG4 134 aaPredicted RBP20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 POSTNQ15063 836 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 GRAMD1CQ8IYS0 662 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 DNAJC18Q9H819 358 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 ARFGAP3Q9NP61 516 aa20.67■□□□□ 0.9
PDLIM3-201ENST00000284767 CDK11BP21127 795 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 NT5C2P49902 561 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 GNAQP50148 359 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 TOGARAM2Q6ZUX3 1019 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 BLIDQ8IZY5 108 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 NFE2L3Q9Y4A8 694 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 TULP2O00295 520 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 MPHOSPH10O00566 681 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 SASH3O75995 380 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 MCM7P33993 719 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 SF3B2Q13435 895 aaKnown RBP20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 GOLGA1Q92805 767 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 FAM198AQ9UFP1 575 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 CEP131Q9UPN4 1083 aa20.66■□□□□ 0.9
PDLIM3-201ENST00000284767 A0A087X0B3 334 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 STXBP3O00186 592 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 POLR3GO15318 223 aaPredicted RBP20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 BAG6P46379 1132 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 SARSP49591 514 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 ATP2B2Q01814 1243 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 PTGDRQ13258 359 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 PTPN21Q16825 1174 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 SERTAD1Q9UHV2 236 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 HNRNPH2P55795 449 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 IRX5P78411 483 aaPredicted RBP20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 GPS2Q13227 327 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 MORC3Q14149 939 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 SMC1AQ14683 1233 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 SH3BP5LQ7L8J4 393 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 PIGSQ96S52 555 aa20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 TDRD3Q9H7E2 651 aaKnown RBP20.65■□□□□ 0.9
PDLIM3-201ENST00000284767 ZNF646O15015 1829 aaPredicted RBP20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 MYH8P13535 1937 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 PRR29P0C7W0 189 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 PDHBP11177 359 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 DPEP1P16444 411 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 OAS2P29728 719 aaKnown RBP20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 NOVP48745 357 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 SMARCE1Q969G3 411 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 TMEM51Q9NW97 253 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 PCDHA4Q9UN74 947 aa20.64■□□□□ 0.9
PDLIM3-201ENST00000284767 A0A0U1RQG5 324 aaPredicted RBP20.64■□□□□ 0.89
PDLIM3-201ENST00000284767 ADKP55263 362 aaKnown RBP20.64■□□□□ 0.89
PDLIM3-201ENST00000284767 FMR1Q06787 632 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM3-201ENST00000284767 KANK3Q6NY19 840 aa20.64■□□□□ 0.89
PDLIM3-201ENST00000284767 ZSCAN29Q8IWY8 852 aaPredicted RBP20.64■□□□□ 0.89
PDLIM3-201ENST00000284767 PARD6BQ9BYG5 372 aa20.64■□□□□ 0.89
PDLIM3-201ENST00000284767 IGKV6D-41A0A0C4DH26 115 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 ZNF579Q8NAF0 562 aaKnown RBP20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 BARHL2Q9NY43 387 aa20.63■□□□□ 0.89
PDLIM3-201ENST00000284767 HLA-DOAP06340 250 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms