RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 REXO1Q8N1G1 1221 aaKnown RBP17.4■□□□□ 0.38
SF3B4-201ENST00000271628 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
SF3B4-201ENST00000271628 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
SF3B4-201ENST00000271628 TRIM5Q9C035 493 aa17.4■□□□□ 0.38
SF3B4-201ENST00000271628 PCDHA5Q9Y5H7 936 aa17.4■□□□□ 0.38
SF3B4-201ENST00000271628 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 BIN1O00499 593 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 ZBTB5O15062 677 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 TPM4P67936 248 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 RBM10P98175 930 aaKnown RBP17.39■□□□□ 0.37
SF3B4-201ENST00000271628 CXCL9Q07325 125 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 SEPT2Q15019 361 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 INF2Q27J81 1249 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 NT5DC1Q5TFE4 455 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 USP49Q70CQ1 688 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 PDILTQ8N807 584 aa17.39■□□□□ 0.37
SF3B4-201ENST00000271628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.39■□□□□ 0.37
SF3B4-201ENST00000271628 ACTN4O43707 911 aaKnown RBP17.38■□□□□ 0.37
SF3B4-201ENST00000271628 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.37
SF3B4-201ENST00000271628 TNIP1Q15025 636 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 DTHD1Q6ZMT9 781 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 FAM83AQ86UY5 434 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 PLA2G4DQ86XP0 818 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 GMCL1P1Q8NEA9 526 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 MTMR8Q96EF0 704 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 FER1L6Q2WGJ9 1857 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 BRCA1P38398 1863 aaKnown RBP17.38■□□□□ 0.37
SF3B4-201ENST00000271628 A0A087WWV3 80 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 TXLNAP40222 546 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 PRPHP41219 470 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 KCTD1Q719H9 257 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 NEK8Q86SG6 692 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 AOPEPQ8N6M6 819 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
SF3B4-201ENST00000271628 CLRN2A0PK11 232 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 IKBKBO14920 756 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 GDF11O95390 407 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 SARSP49591 514 aaKnown RBP17.37■□□□□ 0.37
SF3B4-201ENST00000271628 ZNF75DP51815 510 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 ADCY7P51828 1080 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 IQUBQ8NA54 791 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 SMARCE1Q969G3 411 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 COA7Q96BR5 231 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 DHX58Q96C10 678 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 GLT8D2Q9H1C3 349 aa17.37■□□□□ 0.37
SF3B4-201ENST00000271628 F5H6K3 240 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 SMC2O95347 1197 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 KLRC3Q07444 240 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 TTBK2Q6IQ55 1244 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 SIAH1Q8IUQ4 282 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 GMCL1Q96IK5 515 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 PPP1R1BQ9UD71 204 aaPredicted RBP17.36■□□□□ 0.37
SF3B4-201ENST00000271628 DACH1Q9UI36 760 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 TBC1D12O60347 775 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 GH2P01242 217 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
SF3B4-201ENST00000271628 SPATA20Q8TB22 786 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 RIC8AQ9NPQ8 531 aa17.36■□□□□ 0.37
SF3B4-201ENST00000271628 BIN2Q9UBW5 565 aaPredicted RBP17.36■□□□□ 0.37
SF3B4-201ENST00000271628 FOXN1O15353 648 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 RAD21O60216 631 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 CDC25BP30305 580 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 SLC16A2P36021 539 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 IL17AQ16552 155 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 TBCKQ8TEA7 893 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 MRFAP1L1Q96HT8 127 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 VEZTQ9HBM0 779 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 USP17L10C9JJH3 530 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 CCNT1O60563 726 aaKnown RBP17.35■□□□□ 0.37
SF3B4-201ENST00000271628 RPS12P25398 132 aaKnown RBP17.35■□□□□ 0.37
SF3B4-201ENST00000271628 LETM2Q2VYF4 491 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 ISM2Q6H9L7 571 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 C17orf53Q8N3J3 647 aaPredicted RBP17.35■□□□□ 0.37
SF3B4-201ENST00000271628 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 CUL5Q93034 780 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 ZBED3Q96IU2 234 aaPredicted RBP17.35■□□□□ 0.37
SF3B4-201ENST00000271628 PYCARDQ9ULZ3 195 aa17.35■□□□□ 0.37
SF3B4-201ENST00000271628 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 A0A087X0B3 334 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 TNNI2P48788 182 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 R3HDM1Q15032 1099 aaKnown RBP17.34■□□□□ 0.37
SF3B4-201ENST00000271628 SHROOM1Q2M3G4 852 aaPredicted RBP17.34■□□□□ 0.37
SF3B4-201ENST00000271628 JAKMIP3Q5VZ66 844 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 DRC7Q8IY82 874 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 AK8Q96MA6 479 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 ARHGEF10LQ9HCE6 1279 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 MYOZ2Q9NPC6 264 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
SF3B4-201ENST00000271628 WNT10BO00744 389 aa17.33■□□□□ 0.37
SF3B4-201ENST00000271628 NEMFO60524 1076 aa17.33■□□□□ 0.37
SF3B4-201ENST00000271628 CT47A1Q5JQC4 288 aaPredicted RBP17.33■□□□□ 0.37
SF3B4-201ENST00000271628 GSDMAQ96QA5 445 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms