RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 VPS16Q9H269 839 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 DDX25Q9UHL0 483 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 SALL3Q9BXA9 1300 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 SSR1P43307 286 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 VPS72Q15906 364 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 CFAP221Q4G0U5 840 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 ZNF658Q5TYW1 1059 aaPredicted RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 RCSD1Q6JBY9 416 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 KCTD17Q8N5Z5 321 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 UBL4BQ8N7F7 174 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 DYDC1Q8WWB3 177 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 AS3MTQ9HBK9 375 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 CNTNAP4Q9C0A0 1308 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 ATP8B1O43520 1251 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 WHAMMP3Q1A5X7 153 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 HSP90AA4PQ58FG1 418 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 IFT20Q8IY31 132 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 PROM2Q8N271 834 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 CTNNBL1Q8WYA6 563 aaPredicted RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 SERTAD1Q9UHV2 236 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 SERPINB2P05120 415 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 CTNNA2P26232 953 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 GBP1P32455 592 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 OTUD7BQ6GQQ9 843 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 PODNQ7Z5L7 613 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 KIAA1524Q8TCG1 905 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 LARSQ9P2J5 1176 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 MTRF1LQ9UGC7 380 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 RIOK3O14730 519 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 ACTN4O43707 911 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 GAS7O60861 476 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 PPP1R2P3Q6NXS1 205 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 TMTC3Q6ZXV5 915 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 LCORLQ8N3X6 602 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 MXD3Q9BW11 206 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 RNF14Q9UBS8 474 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 MEGF6O75095 1541 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 GAP43P17677 238 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 DDIT3P35638 169 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 CDHR1Q96JP9 859 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 MRPL44Q9H9J2 332 aaKnown RBP6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 FANCLQ9NW38 375 aa6.56□□□□□ -1.36
SEMA3A-201ENST00000265362 ALCAMQ13740 583 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SMC1AQ14683 1233 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 CFAP58Q5T655 872 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 WDR78Q5VTH9 848 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 FBXO11Q86XK2 927 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SEC31BQ9NQW1 1179 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PCDHA1Q9Y5I3 950 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ZBED4O75132 1171 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 CBX1P83916 185 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 TTLL12Q14166 644 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 MCM6Q14566 821 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 INF2Q27J81 1249 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SBK1Q52WX2 424 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 MAATS1Q7Z4T9 603 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 IFIH1Q9BYX4 1025 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 WDR11Q9BZH6 1224 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ARMCX3Q9UH62 379 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SAR1BQ9Y6B6 198 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PPIP5K2O43314 1243 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PHACTR2O75167 634 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 U2AF2P26368 475 aaKnown RBP eCLIP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ICA1Q05084 483 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PFKFB3Q16875 520 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 FAM47AQ5JRC9 791 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 WDR44Q5JSH3 913 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ZDHHC9Q9Y397 364 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PDS5AQ29RF7 1337 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SPATA31A1Q5TZJ5 1347 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 COL14A1Q05707 1796 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PNMA6FA0A0J9YX94 578 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 TCP1P17987 556 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 RFX5P48382 616 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ENOX2Q16206 610 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 CDC37Q16543 378 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ABCB5Q2M3G0 1257 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SFMBT2Q5VUG0 894 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 RABGGTAQ92696 567 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 SECISBP2LQ93073 1101 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 MYH1P12882 1939 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PRPF4BQ13523 1007 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 GNPTABQ3T906 1256 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 EXOC8Q8IYI6 725 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ANKS4BQ8N8V4 417 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 LARP4BQ92615 738 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 JAG2Q9Y219 1238 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 ASIC2Q16515 512 aa6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 FMR1NBQ8N0W7 255 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 PIH1D3Q9NQM4 214 aaKnown RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 MED1Q15648 1581 aaPredicted RBP6.55□□□□□ -1.36
SEMA3A-201ENST00000265362 APBA3O96018 575 aa6.54□□□□□ -1.36
SEMA3A-201ENST00000265362 ATP5DP30049 168 aa6.54□□□□□ -1.36
SEMA3A-201ENST00000265362 AP3B2Q13367 1082 aa6.54□□□□□ -1.36
SEMA3A-201ENST00000265362 CNKSR2Q8WXI2 1034 aa6.54□□□□□ -1.36
SEMA3A-201ENST00000265362 SCLT1Q96NL6 688 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms