RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 AK8Q96MA6 479 aa18.25■□□□□ 0.51
CTCF-201ENST00000264010 SLIT2O94813 1529 aa18.25■□□□□ 0.51
CTCF-201ENST00000264010 FGRP09769 529 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 CALCRLQ16602 461 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 ZNF658Q5TYW1 1059 aaPredicted RBP18.24■□□□□ 0.51
CTCF-201ENST00000264010 TBC1D16Q8TBP0 767 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 RUFY1Q96T51 708 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 CUEDC2Q9H467 287 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 KCNJ6P48051 423 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 SCNN1DP51172 638 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 CDR1P51861 262 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 GABPB1Q06547 395 aaPredicted RBP18.24■□□□□ 0.51
CTCF-201ENST00000264010 FMR1Q06787 632 aaKnown RBP eCLIP18.24■□□□□ 0.517e-7■■□□□ 12.4
CTCF-201ENST00000264010 SYCP1Q15431 976 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 MAGEF1Q9HAY2 307 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 LZTFL1Q9NQ48 299 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 MYH3P11055 1940 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 KCNJ18B7U540 433 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 TRIM21P19474 475 aaKnown RBP18.24■□□□□ 0.51
CTCF-201ENST00000264010 ZNF76P36508 570 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 USP8P40818 1118 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 KCNJ12Q14500 433 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 FOXP4Q8IVH2 680 aaPredicted RBP18.24■□□□□ 0.51
CTCF-201ENST00000264010 PIGSQ96S52 555 aa18.24■□□□□ 0.51
CTCF-201ENST00000264010 RASA1P20936 1047 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 CCDC70Q6NSX1 233 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 DISC1Q9NRI5 854 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 SWAP70Q9UH65 585 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 SERPINB13Q9UIV8 391 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 LUC7L2Q9Y383 392 aaKnown RBP18.23■□□□□ 0.51
CTCF-201ENST00000264010 LOC102724159A0A0B4J2E5 919 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 CLGNO14967 610 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 MYL1P05976 194 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 PWP2Q15269 919 aaKnown RBP18.23■□□□□ 0.51
CTCF-201ENST00000264010 CNNM4Q6P4Q7 775 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 TMTC1Q8IUR5 882 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 NAP1L4Q99733 375 aaKnown RBP18.23■□□□□ 0.51
CTCF-201ENST00000264010 RABEP2Q9H5N1 569 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
CTCF-201ENST00000264010 RWDD2AQ9UIY3 292 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 GPR75-ASB3A0A0A6YYF3 556 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 hCG_1984214I3L0E3 225 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 CSGALNACT2Q8N6G5 542 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 ZNF713Q8N859 430 aaPredicted RBP18.23■□□□□ 0.51
CTCF-201ENST00000264010 GLT8D2Q9H1C3 349 aa18.23■□□□□ 0.51
CTCF-201ENST00000264010 TECP42680 631 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 CNPY4Q8N129 248 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 TXLNBQ8N3L3 684 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 CEP95Q96GE4 821 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 BCL9LQ86UU0 1499 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 SP8Q8IXZ3 490 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 NPR1P16066 1061 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 CUL4BQ13620 913 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 CUL5Q93034 780 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 SPZ1Q9BXG8 430 aa18.22■□□□□ 0.51
CTCF-201ENST00000264010 FLT1P17948 1338 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 TTLL1O95922 423 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 GYS1P13807 737 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 EARS2Q5JPH6 523 aaKnown RBP18.21■□□□□ 0.51
CTCF-201ENST00000264010 C16orf86Q6ZW13 317 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 CPVLQ9H3G5 476 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 KRT9P35527 623 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 COPB1P53618 953 aaKnown RBP18.21■□□□□ 0.51
CTCF-201ENST00000264010 DPYDQ12882 1025 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 NAA30Q147X3 362 aaPredicted RBP18.21■□□□□ 0.51
CTCF-201ENST00000264010 E4F1Q66K89 784 aaPredicted RBP18.21■□□□□ 0.51
CTCF-201ENST00000264010 TBCKQ8TEA7 893 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 ANKRD65E5RJM6 399 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 FUT2Q10981 343 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 SPA17Q15506 151 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 CYP26C1Q6V0L0 522 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 CAGE1Q8TC20 777 aa18.21■□□□□ 0.51
CTCF-201ENST00000264010 APBA3O96018 575 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 TMEM51Q9NW97 253 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 PCDHA6Q9UN73 950 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 PCDHA8Q9Y5H6 950 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 COBLO75128 1261 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 CYLC1P35663 651 aaPredicted RBP18.2■□□□□ 0.5
CTCF-201ENST00000264010 H0YIN7 160 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 TM4SF1P30408 202 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 CCDC17Q96LX7 622 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 DESI2Q9BSY9 194 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 MYH7P12883 1935 aa18.2■□□□□ 0.5
CTCF-201ENST00000264010 SLC1A4P43007 532 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 MDM2Q00987 491 aaPredicted RBP18.19■□□□□ 0.5
CTCF-201ENST00000264010 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 TCP10Q12799 353 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
CTCF-201ENST00000264010 MAD2L2Q9UI95 211 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 USP17L5A8MUK1 530 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 NAP1L1P55209 391 aaKnown RBP18.19■□□□□ 0.5
CTCF-201ENST00000264010 ZNF569Q5MCW4 686 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
CTCF-201ENST00000264010 NT5DC1Q5TFE4 455 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 ZNF384Q8TF68 577 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 ANKS1AQ92625 1134 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms