RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 NBR1Q14596 966 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 CHADLQ6NUI6 762 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 TMEM87AQ8NBN3 555 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 TANGO6Q9C0B7 1094 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 RANBP17Q9H2T7 1088 aaKnown RBP26.05■■□□□ 1.76
UFD1-201ENST00000263202 LMBRD1Q9NUN5 540 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 CFAP45Q9UL16 551 aa26.05■■□□□ 1.76
UFD1-201ENST00000263202 UNCXA6NJT0 531 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 M0R2N6 131 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 OTUD5Q96G74 571 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 USP28Q96RU2 1077 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 SLF1Q9BQI6 1058 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 AMNQ9BXJ7 453 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 C6orf50Q9HD87 102 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 TMOD4Q9NZQ9 345 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 PRPF40AO75400 957 aaKnown RBP26.04■■□□□ 1.76
UFD1-201ENST00000263202 ITGBL1O95965 494 aaPredicted RBP26.04■■□□□ 1.76
UFD1-201ENST00000263202 FKBP1BP68106 108 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 FBXO11Q86XK2 927 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 PRPF38AQ8NAV1 312 aaKnown RBP26.04■■□□□ 1.76
UFD1-201ENST00000263202 FTOQ9C0B1 505 aaKnown RBP eCLIP26.04■■□□□ 1.76
UFD1-201ENST00000263202 SMCHD1A6NHR9 2005 aa26.04■■□□□ 1.76
UFD1-201ENST00000263202 IRF6O14896 467 aa26.03■■□□□ 1.76
UFD1-201ENST00000263202 GNA11P29992 359 aa26.03■■□□□ 1.76
UFD1-201ENST00000263202 EARS2Q5JPH6 523 aaKnown RBP26.03■■□□□ 1.76
UFD1-201ENST00000263202 SCAND2PQ9GZW5 306 aaPredicted RBP26.03■■□□□ 1.76
UFD1-201ENST00000263202 GBA2Q9HCG7 927 aaPredicted RBP26.03■■□□□ 1.76
UFD1-201ENST00000263202 PCDHA1Q9Y5I3 950 aa26.03■■□□□ 1.76
UFD1-201ENST00000263202 CELF2O95319 508 aaKnown RBP26.02■■□□□ 1.76
UFD1-201ENST00000263202 PPIL2Q13356 520 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 OPTNQ96CV9 577 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 FAM205CA6NFA0 338 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 FLOT1O75955 427 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 PTMSP20962 102 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 NOM1Q5C9Z4 860 aaKnown RBP26.02■■□□□ 1.76
UFD1-201ENST00000263202 SAMD1Q6SPF0 538 aaPredicted RBP26.02■■□□□ 1.76
UFD1-201ENST00000263202 PCDHA6Q9UN73 950 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 PCDHA8Q9Y5H6 950 aa26.02■■□□□ 1.76
UFD1-201ENST00000263202 CEBPZQ03701 1054 aaKnown RBP26.01■■□□□ 1.75
UFD1-201ENST00000263202 CSPP1Q1MSJ5 1256 aa26.01■■□□□ 1.75
UFD1-201ENST00000263202 LEO1Q8WVC0 666 aaPredicted RBP26.01■■□□□ 1.75
UFD1-201ENST00000263202 SPATA32Q96LK8 384 aa26.01■■□□□ 1.75
UFD1-201ENST00000263202 RTEL1Q9NZ71 1219 aa26.01■■□□□ 1.75
UFD1-201ENST00000263202 PPP1R9AQ9ULJ8 1098 aa26.01■■□□□ 1.75
UFD1-201ENST00000263202 KCNH4Q9UQ05 1017 aa26.01■■□□□ 1.75
UFD1-201ENST00000263202 COL11A1P12107 1806 aaPredicted RBP26.01■■□□□ 1.75
UFD1-201ENST00000263202 CXCL11O14625 94 aa26■■□□□ 1.75
UFD1-201ENST00000263202 TOB1P50616 345 aaPredicted RBP26■■□□□ 1.75
UFD1-201ENST00000263202 ADCY7P51828 1080 aa26■■□□□ 1.75
UFD1-201ENST00000263202 C2orf69Q8N8R5 385 aa26■■□□□ 1.75
UFD1-201ENST00000263202 RASGRP4Q8TDF6 673 aa26■■□□□ 1.75
UFD1-201ENST00000263202 RIC8AQ9NPQ8 531 aa26■■□□□ 1.75
UFD1-201ENST00000263202 POLR3EQ9NVU0 708 aa26■■□□□ 1.75
UFD1-201ENST00000263202 CLIC4Q9Y696 253 aa26■■□□□ 1.75
UFD1-201ENST00000263202 A0A0G2JLL6 359 aaPredicted RBP26■■□□□ 1.75
UFD1-201ENST00000263202 USH1GQ495M9 461 aa26■■□□□ 1.75
UFD1-201ENST00000263202 RILPL1Q5EBL4 403 aa26■■□□□ 1.75
UFD1-201ENST00000263202 CCDC174Q6PII3 467 aa26■■□□□ 1.75
UFD1-201ENST00000263202 PRRT2Q7Z6L0 340 aaPredicted RBP26■■□□□ 1.75
UFD1-201ENST00000263202 BICD2Q8TD16 824 aa26■■□□□ 1.75
UFD1-201ENST00000263202 SLC10A4Q96EP9 437 aa26■■□□□ 1.75
UFD1-201ENST00000263202 ELP1O95163 1332 aa25.99■■□□□ 1.75
UFD1-201ENST00000263202 CATSPERGQ6ZRH7 1159 aa25.99■■□□□ 1.75
UFD1-201ENST00000263202 PIK3AP1Q6ZUJ8 805 aa25.99■■□□□ 1.75
UFD1-201ENST00000263202 GPBP1L1Q9HC44 474 aaPredicted RBP25.99■■□□□ 1.75
UFD1-201ENST00000263202 RCOR1Q9UKL0 485 aa25.99■■□□□ 1.75
UFD1-201ENST00000263202 NASPP49321 788 aaPredicted RBP25.98■■□□□ 1.75
UFD1-201ENST00000263202 TRAF1Q13077 416 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 CST9Q5W186 159 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 ANO1Q5XXA6 986 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L15C9J2P7 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L13C9JLJ4 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L11C9JVI0 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L18D6R9N7 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L22D6RA61 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L17D6RBQ6 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L19D6RCP7 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L20D6RJB6 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 TAL1P17542 331 aaPredicted RBP25.98■■□□□ 1.75
UFD1-201ENST00000263202 GJA5P36382 358 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 USP17L24Q0WX57 530 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 PROCA1Q8NCQ7 364 aaPredicted RBP25.98■■□□□ 1.75
UFD1-201ENST00000263202 CUL5Q93034 780 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 SLC38A10Q9HBR0 1119 aa25.98■■□□□ 1.75
UFD1-201ENST00000263202 ZNF536O15090 1300 aa25.97■■□□□ 1.75
UFD1-201ENST00000263202 TREML2Q5T2D2 321 aa25.97■■□□□ 1.75
UFD1-201ENST00000263202 REXO1Q8N1G1 1221 aaKnown RBP25.97■■□□□ 1.75
UFD1-201ENST00000263202 PSTPIP2Q9H939 334 aa25.97■■□□□ 1.75
UFD1-201ENST00000263202 GADD45BO75293 160 aaPredicted RBP25.96■■□□□ 1.75
UFD1-201ENST00000263202 YEATS4O95619 227 aa25.96■■□□□ 1.75
UFD1-201ENST00000263202 MRPL12P52815 198 aaKnown RBP25.96■■□□□ 1.75
UFD1-201ENST00000263202 COG2Q14746 738 aa25.96■■□□□ 1.75
UFD1-201ENST00000263202 SF3A1Q15459 793 aaKnown RBP25.96■■□□□ 1.75
UFD1-201ENST00000263202 LINC00301Q8NCQ3 95 aa25.96■■□□□ 1.75
UFD1-201ENST00000263202 BIN2Q9UBW5 565 aaPredicted RBP25.96■■□□□ 1.75
UFD1-201ENST00000263202 NOL7Q9UMY1 257 aaKnown RBP25.96■■□□□ 1.75
UFD1-201ENST00000263202 CCDC194A0A1B0GVG4 234 aa25.95■■□□□ 1.75
UFD1-201ENST00000263202 ICAM1P05362 532 aa25.95■■□□□ 1.75
UFD1-201ENST00000263202 FDX1P10109 184 aa25.95■■□□□ 1.75
UFD1-201ENST00000263202 DSG3P32926 999 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms