RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 CCL14Q16627 93 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 MROH8Q9H579 483 aa11.13□□□□□ -0.63
TTC39A-201ENST00000262675 RPAP3Q9H6T3 665 aaPredicted RBP11.13□□□□□ -0.63
TTC39A-201ENST00000262675 H3BQV1 296 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 CTAGE5O15320 804 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
TTC39A-201ENST00000262675 SHMT1P34896 483 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 FGD1P98174 961 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 LRRC26Q2I0M4 334 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 MTERF4Q7Z6M4 381 aaKnown RBP11.12□□□□□ -0.63
TTC39A-201ENST00000262675 DPP9Q86TI2 863 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
TTC39A-201ENST00000262675 PIBF1Q8WXW3 757 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 ZNF274Q96GC6 653 aaPredicted RBP11.12□□□□□ -0.63
TTC39A-201ENST00000262675 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 NRBP1Q9UHY1 535 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 MYH8P13535 1937 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 LAMA4Q16363 1823 aa11.12□□□□□ -0.63
TTC39A-201ENST00000262675 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 GABPAQ06546 454 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 A0A0G2JMZ2 1700 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 CNGA1P29973 690 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 COPB2P35606 906 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 EVCP57679 992 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 RESTQ13127 1097 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 HSP90AA2PQ14568 343 aaPredicted RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 SASS6Q6UVJ0 657 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 SENP6Q9GZR1 1112 aaPredicted RBP11.11□□□□□ -0.63
TTC39A-201ENST00000262675 TNMDQ9H2S6 317 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 CLSTN2Q9H4D0 955 aa11.11□□□□□ -0.63
TTC39A-201ENST00000262675 MYH15Q9Y2K3 1946 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 GOLIM4O00461 696 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 IGHA2P01877 340 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 CYBAP13498 195 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 SHROOM1Q2M3G4 852 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-201ENST00000262675 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 BRF1Q92994 677 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 SPATC1LQ9H0A9 340 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 BTBD7Q9P203 1132 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 WDR19Q8NEZ3 1342 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 DYNC1I1O14576 645 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 SLC25A27O95847 323 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
TTC39A-201ENST00000262675 SLC9C2Q5TAH2 1124 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-201ENST00000262675 ACER1Q8TDN7 264 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 ATP8A2Q9NTI2 1148 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 MCM9Q9NXL9 1143 aa11.1□□□□□ -0.63
TTC39A-201ENST00000262675 MPHOSPH10O00566 681 aaKnown RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 SEPT4O43236 478 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 PEX10O60683 326 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 PDE6AP16499 860 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 PLCD1P51178 756 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 TYRO3Q06418 890 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 SCRN1Q12765 414 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 STK3Q13188 491 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 SEPT2Q15019 361 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 FERMT3Q86UX7 667 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 TCEANC2Q96MN5 208 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 MOV10L1Q9BXT6 1211 aaKnown RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 FLRT1Q9NZU1 646 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 TAF6LQ9Y6J9 622 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 RLFQ13129 1914 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 WDR46O15213 610 aaKnown RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 ADORA2AP29274 412 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 DSG3P32926 999 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 RTP1P59025 263 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 NSUN7Q8NE18 718 aaKnown RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 NPLOC4Q8TAT6 608 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 PDCL3Q9H2J4 239 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 DACT1Q9NYF0 836 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 RCOR1Q9UKL0 485 aa11.09□□□□□ -0.63
TTC39A-201ENST00000262675 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
TTC39A-201ENST00000262675 LTBP2Q14767 1821 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms