RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 LINC01465Q8N7H1 131 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 TTF2Q9UNY4 1162 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 EML5Q05BV3 1969 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 TP73O15350 636 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 EDNRBP24530 442 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ADAM17P78536 824 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 CCSAPQ6IQ19 270 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ANGEL1Q9UNK9 670 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 SLC4A4Q9Y6R1 1079 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 DENND4AQ7Z401 1863 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 PTPRJQ12913 1337 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 FRMD3A2A2Y4 597 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 ADGRF4Q8IZF3 695 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 CNNM1Q9NRU3 951 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 VPS54Q9P1Q0 977 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 GGA1Q9UJY5 639 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 ZNRF3Q9ULT6 936 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 B4GALT3O60512 393 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 VGLL4Q14135 290 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 MARCH8Q5T0T0 291 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 SLC39A4Q6P5W5 647 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 KIAA0895Q8NCT3 520 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 NYXQ9GZU5 481 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 TFIP11Q9UBB9 837 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 LIMCH1Q9UPQ0 1083 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 FBN2P35556 2912 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 GUCY1B3Q02153 619 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 CHADLQ6NUI6 762 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 FAM43AQ8N2R8 423 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 PPP1R13LQ8WUF5 828 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 SYT11Q9BT88 431 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 TTYH3Q9C0H2 523 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 HDLBPQ00341 1268 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 RASA3Q14644 834 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 NOL8Q76FK4 1167 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 POTEDQ86YR6 584 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 COL27A1Q8IZC6 1860 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 DOCK8Q8NF50 2099 aa6.69□□□□□ -1.34
TOPBP1-201ENST00000260810 TESPA1A2RU30 521 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 CAP2P40123 477 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TAF1DQ9H5J8 278 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 POLD4Q9HCU8 107 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 ATP8A2Q9NTI2 1148 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TENM4Q6N022 2769 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 PPP1R37O75864 691 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 GABBR2O75899 941 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 AMHP03971 560 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 PFKFB3Q16875 520 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 VPS37DQ86XT2 251 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 ZC3H3Q8IXZ2 948 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 MICALL2Q8IY33 904 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 BANK1Q8NDB2 785 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 AGBL1Q96MI9 1066 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 PORCNQ9H237 461 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 RANBP17Q9H2T7 1088 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 CHMP4BQ9H444 224 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TUBE1Q9UJT0 475 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TMX2Q9Y320 296 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 ANK2Q01484 3957 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TDP2O95551 362 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 HSD17B4P51659 736 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 EIF6P56537 245 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 DUSP9Q99956 384 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 ZNF263O14978 683 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 POTEGQ6S5H5 508 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 CNTROBQ8N137 903 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 LRRC47Q8N1G4 583 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 COA7Q96BR5 231 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 SOWAHBA6NEL2 793 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TRIM6-TRIM34B2RNG4 842 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 APPP05067 770 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TFAP4Q01664 338 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 TBC1D10BQ4KMP7 808 aaPredicted RBP6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 SH3D19Q5HYK7 790 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 ERC1Q8IUD2 1116 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 UIMC1Q96RL1 719 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 CHMP4AQ9BY43 222 aa6.68□□□□□ -1.34
TOPBP1-201ENST00000260810 MYO3BQ8WXR4 1341 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 NPTXRO95502 500 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 ABCF2Q9UG63 623 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 NRBP1Q9UHY1 535 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 TISP43B9A030 160 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 BMP1P13497 986 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 AFF1P51825 1210 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 TRIM32Q13049 653 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 KCTD1Q719H9 257 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 LMO3Q8TAP4 145 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 IGKV6D-21A0A0A0MT36 114 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L17D6RBQ6 530 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms