RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 LARSQ9P2J5 1176 aaKnown RBP10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 PARP2Q9UGN5 583 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 SSX2IPQ9Y2D8 614 aa10.71□□□□□ -0.69
CTDSPL2-201ENST00000260327 ABCA5Q8WWZ7 1642 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 PABPN1LA6NDY0 278 aaKnown RBP10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 NR1D1P20393 614 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 RANBP1P43487 201 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 SLC39A14Q15043 492 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCDC84Q86UT8 332 aaPredicted RBP10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 GSPT2Q8IYD1 628 aaKnown RBP10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 IFNL3Q8IZI9 196 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 FAM167BQ9BTA0 163 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 NUCKS1Q9H1E3 243 aaKnown RBP10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 RCOR1Q9UKL0 485 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 TACC3Q9Y6A5 838 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 PBRM1Q86U86 1689 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 PPARAQ07869 468 aa10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 NONOQ15233 471 aaKnown RBP eCLIP10.71□□□□□ -0.7
CTDSPL2-201ENST00000260327 ATP10AO60312 1499 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 THAP12O43422 761 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 CALCRLQ16602 461 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 LINC00301Q8NCQ3 95 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 VCX3AQ9NNX9 186 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 SUFUQ9UMX1 484 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PRAMEF22A3QJZ6 481 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 SLCO1A2P46721 670 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 RESTQ13127 1097 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 RCN2Q14257 317 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 TAB3Q8N5C8 712 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 KIFAP3Q92845 792 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 ACTR5Q9H9F9 607 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 NOVA2Q9UNW9 492 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 ATP8A1Q9Y2Q0 1164 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 CHUKO15111 745 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 ADCY8P40145 1251 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 SP4Q02446 784 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 BIRC3Q13489 604 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 CTAGE3PQ8IX95 158 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 NGLY1Q96IV0 654 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 SAMSN1Q9NSI8 373 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PTPN22Q9Y2R2 807 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 ADORA1P30542 326 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PDLIM2Q96JY6 352 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 M0R2C6 588 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 CALUO43852 315 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 TECP42680 631 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 COPB1P53618 953 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 SH3BGRP55822 239 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 ST5P78524 1137 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PTGDRQ13258 359 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 SH3TC1Q8TE82 1336 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 KIF2CQ99661 725 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PUS3Q9BZE2 481 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PFDN4Q9NQP4 134 aa10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 BIN2Q9UBW5 565 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-201ENST00000260327 PDHA1P08559 390 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 TFAP4Q01664 338 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 TRIML1Q8N9V2 468 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 LRRC8CQ8TDW0 803 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 IRAK4Q9NWZ3 460 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCDC169A6NNP5 214 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 HIBADHP31937 336 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 POLR2FP61218 127 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCDC14Q49A88 953 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 GDAP1Q8TB36 358 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 B4DLN1 442 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 CRCPO75575 148 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 RPN1P04843 607 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 HARSP12081 509 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 MAN1A1P33908 653 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 DNM2P50570 870 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 PPP2R5CQ13362 524 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 NECTIN1Q15223 517 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 MOCS3O95396 460 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 GNPTABQ3T906 1256 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 PRR16Q569H4 304 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 AIFM3Q96NN9 605 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 IFNB1P01574 187 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 PDE6AP16499 860 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 GGCXP38435 758 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 CCDC144BQ3MJ40 725 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 CASC4Q6P4E1 433 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 TOGARAM2Q6ZUX3 1019 aa10.69□□□□□ -0.7
CTDSPL2-201ENST00000260327 DNAJC10Q8IXB1 793 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms