RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 PABPC4Q13310 644 aaKnown RBP eCLIP18.01■□□□□ 0.475e-10■■■■■ 32.8
GYPC-201ENST00000259254 CCL15Q16663 113 aa18.01■□□□□ 0.47
GYPC-201ENST00000259254 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
GYPC-201ENST00000259254 TREML2Q5T2D2 321 aa18.01■□□□□ 0.47
GYPC-201ENST00000259254 MCOLN1Q9GZU1 580 aa18.01■□□□□ 0.47
GYPC-201ENST00000259254 MYH4Q9Y623 1939 aa18■□□□□ 0.47
GYPC-201ENST00000259254 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
GYPC-201ENST00000259254 ZBTB5O15062 677 aa18■□□□□ 0.47
GYPC-201ENST00000259254 SYT1P21579 422 aa18■□□□□ 0.47
GYPC-201ENST00000259254 IRX3P78415 501 aaPredicted RBP18■□□□□ 0.47
GYPC-201ENST00000259254 GUCY1B3Q02153 619 aa18■□□□□ 0.47
GYPC-201ENST00000259254 PKN1Q16512 942 aa18■□□□□ 0.47
GYPC-201ENST00000259254 QRICH1Q2TAL8 776 aa18■□□□□ 0.47
GYPC-201ENST00000259254 CCDC174Q6PII3 467 aa18■□□□□ 0.47
GYPC-201ENST00000259254 CATSPERGQ6ZRH7 1159 aa18■□□□□ 0.47
GYPC-201ENST00000259254 PRPF38AQ8NAV1 312 aaKnown RBP18■□□□□ 0.47
GYPC-201ENST00000259254 GPKOWQ92917 476 aaPredicted RBP eCLIP18■□□□□ 0.47
GYPC-201ENST00000259254 PPP1R9AQ9ULJ8 1098 aa18■□□□□ 0.47
GYPC-201ENST00000259254 AGTPBP1Q9UPW5 1226 aa18■□□□□ 0.47
GYPC-201ENST00000259254 STX6O43752 255 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 ZBED4O75132 1171 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 INHBEP58166 350 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 COG2Q14746 738 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 OTUD7BQ6GQQ9 843 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 VPS54Q9P1Q0 977 aa17.99■□□□□ 0.47
GYPC-201ENST00000259254 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
GYPC-201ENST00000259254 TBC1D8O95759 1140 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 OSBPP22059 807 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 NUCB2P80303 420 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 MOGSQ13724 837 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 FOXD4L5Q5VV16 416 aaPredicted RBP17.98■□□□□ 0.47
GYPC-201ENST00000259254 WWC2Q6AWC2 1192 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 FOXD4L4Q8WXT5 416 aaPredicted RBP17.98■□□□□ 0.47
GYPC-201ENST00000259254 ATG4CQ96DT6 458 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 CFHR5Q9BXR6 569 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 GJB4Q9NTQ9 266 aa17.98■□□□□ 0.47
GYPC-201ENST00000259254 ALDH1A1P00352 501 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 DSG3P32926 999 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 DDIT3P35638 169 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 NAPAP54920 295 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 NLRP5P59047 1200 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 NOM1Q5C9Z4 860 aaKnown RBP17.97■□□□□ 0.47
GYPC-201ENST00000259254 KRT40Q6A162 431 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 BRI3BPQ8WY22 251 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 COA7Q96BR5 231 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
GYPC-201ENST00000259254 HOXC10Q9NYD6 342 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 KCNJ14Q9UNX9 436 aa17.97■□□□□ 0.47
GYPC-201ENST00000259254 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 STXBP3O00186 592 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 PDIA4P13667 645 aaKnown RBP17.96■□□□□ 0.47
GYPC-201ENST00000259254 HOXA7P31268 230 aaPredicted RBP17.96■□□□□ 0.47
GYPC-201ENST00000259254 TRAF1Q13077 416 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 GNL2Q13823 731 aaKnown RBP17.96■□□□□ 0.47
GYPC-201ENST00000259254 PKP1Q13835 747 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
GYPC-201ENST00000259254 USH1GQ495M9 461 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 MCTP1Q6DN14 999 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 GPAT2Q6NUI2 795 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 IFNL1Q8IU54 200 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
GYPC-201ENST00000259254 FBXO18Q8NFZ0 1043 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 CCDC12Q8WUD4 166 aaPredicted RBP17.96■□□□□ 0.47
GYPC-201ENST00000259254 BARHL2Q9NY43 387 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
GYPC-201ENST00000259254 MYPNQ86TC9 1320 aa17.96■□□□□ 0.46
GYPC-201ENST00000259254 PHIPQ8WWQ0 1821 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 SPDYE16A6NNV3 312 aaPredicted RBP17.95■□□□□ 0.46
GYPC-201ENST00000259254 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 GPR25O00155 361 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 PDHXO00330 501 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 IGF2BP3O00425 579 aaKnown RBP eCLIP17.95■□□□□ 0.46
GYPC-201ENST00000259254 VWA5AO00534 786 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 PPP1R11O60927 126 aaPredicted RBP17.95■□□□□ 0.46
GYPC-201ENST00000259254 FDX1P10109 184 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 ANKRD23Q86SG2 305 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 ZNF296Q8WUU4 475 aaPredicted RBP17.95■□□□□ 0.46
GYPC-201ENST00000259254 ASCC2Q9H1I8 757 aaPredicted RBP17.95■□□□□ 0.46
GYPC-201ENST00000259254 RAVER2Q9HCJ3 691 aaKnown RBP17.95■□□□□ 0.46
GYPC-201ENST00000259254 BRMS1Q9HCU9 246 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 SH3GLB2Q9NR46 395 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 CCPG1Q9ULG6 757 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 MTMR6Q9Y217 621 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
GYPC-201ENST00000259254 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
GYPC-201ENST00000259254 ZSCAN22P10073 491 aaPredicted RBP17.94■□□□□ 0.46
GYPC-201ENST00000259254 PPP1R18Q6NYC8 613 aa17.94■□□□□ 0.46
GYPC-201ENST00000259254 CTU1Q7Z7A3 348 aaKnown RBP17.94■□□□□ 0.46
GYPC-201ENST00000259254 P2RX7Q99572 595 aaKnown RBP17.94■□□□□ 0.46
GYPC-201ENST00000259254 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
GYPC-201ENST00000259254 CCDC85CA6NKD9 419 aa17.93■□□□□ 0.46
GYPC-201ENST00000259254 MMP1P03956 469 aa17.93■□□□□ 0.46
GYPC-201ENST00000259254 ICAM1P05362 532 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms