RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PRKAG2Q9UGJ0 569 aa22.49■■□□□ 1.19
TM6SF1-201ENST00000258909 FBXO40Q9UH90 709 aa22.49■■□□□ 1.19
TM6SF1-201ENST00000258909 ZNF536O15090 1300 aa22.49■■□□□ 1.19
TM6SF1-201ENST00000258909 SYNGAP1Q96PV0 1343 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 FGRP09769 529 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 PPP4R3BQ5MIZ7 849 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 MAMDC4Q6UXC1 1216 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 RNF180Q86T96 592 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 PLEKHM2Q8IWE5 1019 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 MSL3Q8N5Y2 521 aaKnown RBP22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 PHF24Q9UPV7 400 aa22.48■■□□□ 1.19
TM6SF1-201ENST00000258909 CCDC171Q6TFL3 1326 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 FDX1P10109 184 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 CNTN2Q02246 1040 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 NUCB1Q02818 461 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 RNF146Q9NTX7 359 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 FAM184BQ9ULE4 1060 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 PRR12Q9ULL5 1215 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 ADAMTS4O75173 837 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 ALAS1P13196 640 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 SDSP20132 328 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 SNX17Q15036 470 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 CCDC96Q2M329 555 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 LRIT3Q3SXY7 679 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 SH3RF1Q7Z6J0 888 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 ZNF467Q7Z7K2 595 aaPredicted RBP22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 ACAD9Q9H845 621 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 LTBP2Q14767 1821 aa22.47■■□□□ 1.19
TM6SF1-201ENST00000258909 SYNRGQ9UMZ2 1314 aa22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 NOVP48745 357 aa22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 IRX5P78411 483 aaPredicted RBP22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 ACVR2BQ13705 512 aa22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 TTBK2Q6IQ55 1244 aa22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 TRERF1Q96PN7 1200 aa22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 A1CFQ9NQ94 594 aaKnown RBP22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 COL6A3P12111 3177 aa22.46■■□□□ 1.19
TM6SF1-201ENST00000258909 A0A1W2PQ45 241 aaPredicted RBP22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 A0A1W2PQY0 241 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 ADCY6O43306 1168 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 PLA2G6O60733 806 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 SLC16A2P36021 539 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 TLE2Q04725 743 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 ARMCX2Q7L311 632 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 TICAM2Q86XR7 235 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 CCDC144CPQ8IYA2 1237 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 TMEM47Q9BQJ4 181 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 PDLIM7Q9NR12 457 aa22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 DDX49Q9Y6V7 483 aaKnown RBP22.45■■□□□ 1.18
TM6SF1-201ENST00000258909 MYADML2A6NDP7 307 aa22.44■■□□□ 1.18
TM6SF1-201ENST00000258909 POTEB2H3BUK9 544 aa22.44■■□□□ 1.18
TM6SF1-201ENST00000258909 MUM1L1Q5H9M0 696 aa22.44■■□□□ 1.18
TM6SF1-201ENST00000258909 Q7L0L9 218 aa22.44■■□□□ 1.18
TM6SF1-201ENST00000258909 TBC1D10CQ8IV04 446 aa22.44■■□□□ 1.18
TM6SF1-201ENST00000258909 OSBPL3Q9H4L5 887 aa22.44■■□□□ 1.18
TM6SF1-201ENST00000258909 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 FRMPD2Q68DX3 1309 aaPredicted RBP22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 TRIM43BA6NCK2 446 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 SOWAHBA6NEL2 793 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 CCDC144BQ3MJ40 725 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 CWC27Q6UX04 472 aaKnown RBP22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 FAM133AQ8N9E0 248 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 DCAF4Q8WV16 495 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 BADQ92934 168 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 TRIM43Q96BQ3 446 aaPredicted RBP22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 ABHD16BQ9H3Z7 469 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 GPCPD1Q9NPB8 672 aa22.43■■□□□ 1.18
TM6SF1-201ENST00000258909 TOP1P11387 765 aaKnown RBP22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 ACLYP53396 1101 aa22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 KCNA10Q16322 511 aa22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 AKNAD1Q5T1N1 836 aa22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 C1orf53Q5VUE5 145 aa22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 MFSD6Q6ZSS7 791 aa22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 SUPT16HQ9Y5B9 1047 aaKnown RBP22.42■■□□□ 1.18
TM6SF1-201ENST00000258909 PQBP1O60828 265 aaKnown RBP22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 DUSP11O75319 330 aaKnown RBP22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 TKFCQ3LXA3 575 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 DEFB123Q8N688 67 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 KLHDC9Q8NEP7 349 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 KATNBL1Q9H079 304 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 TCP11L1Q9NUJ3 509 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 CCPG1Q9ULG6 757 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 C6orf222P0C671 652 aaPredicted RBP22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 PURBQ96QR8 312 aaKnown RBP22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 ZKSCAN3Q9BRR0 538 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 TSEN34Q9BSV6 310 aaKnown RBP22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 DIAPH3Q9NSV4 1193 aa22.41■■□□□ 1.18
TM6SF1-201ENST00000258909 ASTN1O14525 1302 aa22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 NEDD4P46934 1319 aa22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 ITGB8P26012 769 aa22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 MFAP1P55081 439 aaKnown RBP22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 SYDE2Q5VT97 1194 aa22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 CCSAPQ6IQ19 270 aaPredicted RBP22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 NSMFQ6X4W1 530 aa22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 RANBP17Q9H2T7 1088 aaKnown RBP22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 STARD7Q9NQZ5 370 aa22.4■■□□□ 1.18
TM6SF1-201ENST00000258909 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.39■■□□□ 1.17
TM6SF1-201ENST00000258909 ICAM1P05362 532 aa22.39■■□□□ 1.17
TM6SF1-201ENST00000258909 CLTBP09497 229 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms