RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 H7C1D1 291 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 AHCYL1O43865 530 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 NAPAP54920 295 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 NOSTRINQ8IVI9 506 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 KBTBD3Q8NAB2 608 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ELAC2Q9BQ52 826 aaKnown RBP11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ADCY9O60503 1353 aa11.22□□□□□ -0.61
TRPM1-201ENST00000256552 ARHGAP42A6NI28 874 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 MYBL2P10244 700 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 SLC44A4Q53GD3 710 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 TOM1L2Q6ZVM7 507 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 TXNDC16Q9P2K2 825 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 LRWD1Q9UFC0 647 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 MCM8Q9UJA3 840 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 CFAP73A6NFT4 308 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 MFAP3LO75121 409 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 MOCS3O95396 460 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 CTCFP49711 727 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-201ENST00000256552 USP14P54578 494 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 TXLNGQ9NUQ3 528 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 AMFRQ9UKV5 643 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 ATP8A1Q9Y2Q0 1164 aa11.21□□□□□ -0.61
TRPM1-201ENST00000256552 EXOC5O00471 708 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 HSPA1LP34931 641 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 TEKT4Q8WW24 435 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 ZNF653Q96CK0 615 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 SYNCQ9H7C4 482 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 GJA8P48165 433 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.62
TRPM1-201ENST00000256552 SMYD4Q8IYR2 804 aaPredicted RBP11.21□□□□□ -0.62
TRPM1-201ENST00000256552 HDAC9Q9UKV0 1011 aa11.21□□□□□ -0.62
TRPM1-201ENST00000256552 CARMIL3Q8ND23 1372 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 IRF6O14896 467 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 PPP6R2O75170 966 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 GUCY1A3Q02108 690 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 DHX9Q08211 1270 aaKnown RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 ADAT2Q7Z6V5 191 aaKnown RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 BPIFA3Q9BQP9 254 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 FUT8Q9BYC5 575 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 ZNF711Q9Y462 761 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 DYTNA2CJ06 578 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 MAP3K7O43318 606 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 EVI5O60447 810 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 TIMM10P62072 90 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 BEND6Q5SZJ8 279 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 MAP7D3Q8IWC1 876 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 NSMCE1Q8WV22 266 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 SPECC1L-ADORA2AF8WAN1 911 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 USP37Q86T82 979 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 SCYL3Q8IZE3 742 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 HNRNPLLQ8WVV9 542 aaKnown RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 A1CFQ9NQ94 594 aaKnown RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 UBAP1Q9NZ09 502 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 STX8Q9UNK0 236 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 SASH1O94885 1247 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 SPATA21Q7Z572 469 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 GFM2Q969S9 779 aaKnown RBP11.2□□□□□ -0.62
TRPM1-201ENST00000256552 IL17RAQ96F46 866 aa11.2□□□□□ -0.62
TRPM1-201ENST00000256552 hCG_2014768A0A024R1R8 64 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 B4DLN1 442 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 H0Y3Z8 333 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CYP7A1P22680 504 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ARL1P40616 181 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 KCNJ6P48051 423 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 KCNB1Q14721 858 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CYB5D1Q6P9G0 228 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 LCA5Q86VQ0 697 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 NME8Q8N427 588 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 PARP3Q9Y6F1 533 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 TMCC1O94876 653 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 SNX16P57768 344 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 Q4G0T1 1027 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 OLFML1Q6UWY5 402 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ZC3H18Q86VM9 953 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ERMNQ8TAM6 284 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 I3L4J1 428 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 C21orf2O43822 256 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 PARP1P09874 1014 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 PRPF31Q8WWY3 499 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CUL5Q93034 780 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ADGRG1Q9Y653 693 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 GCC2Q8IWJ2 1684 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms