RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 MIIPQ5JXC2 388 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 RSRC2Q7L4I2 434 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 SH3BP5LQ7L8J4 393 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 ATP8A2Q9NTI2 1148 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 TRIM49BA6NDI0 452 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 ZNF263O14978 683 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 DDAH1O94760 285 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 GRAPQ13588 217 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 KCNK18Q7Z418 384 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 GRAPLQ8TC17 118 aaPredicted RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 FAM163AQ96GL9 167 aaPredicted RBP10.39□□□□□ -0.75
RPA1-201ENST00000254719 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
RPA1-201ENST00000254719 HOXA10P31260 410 aaPredicted RBP10.38□□□□□ -0.75
RPA1-201ENST00000254719 C16orf86Q6ZW13 317 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 MTMR9Q96QG7 549 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 GOLGA8HP0CJ92 632 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 SCG2P13521 617 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 KLK7P49862 253 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 IQCEQ6IPM2 695 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 NEK11Q8NG66 645 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 UBXN4Q92575 508 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 ESR2Q92731 530 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 HPS3Q969F9 1004 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 GJA10Q969M2 543 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 EPHB6O15197 1021 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 CALM1P0DP23 149 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 CALM2P0DP24 149 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 CALM3P0DP25 149 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 PRCPP42785 496 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 DAGLBQ8NCG7 672 aa10.38□□□□□ -0.75
RPA1-201ENST00000254719 CWC15Q9P013 229 aaKnown RBP10.38□□□□□ -0.75
RPA1-201ENST00000254719 OPLAHO14841 1288 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 EIF3JO75822 258 aaKnown RBP10.37□□□□□ -0.75
RPA1-201ENST00000254719 RBL2Q08999 1139 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 ERCC6LQ2NKX8 1250 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 IFIT1BQ5T764 474 aaKnown RBP10.37□□□□□ -0.75
RPA1-201ENST00000254719 SYT10Q6XYQ8 523 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 CCDC12Q8WUD4 166 aaPredicted RBP10.37□□□□□ -0.75
RPA1-201ENST00000254719 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 BMP2KQ9NSY1 1161 aaPredicted RBP10.37□□□□□ -0.75
RPA1-201ENST00000254719 BLOC1S4Q9NUP1 217 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 TADA3O75528 432 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 CDR1P51861 262 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 PPP2R5BQ15173 497 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 KIAA0895Q8NCT3 520 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 MTMR8Q96EF0 704 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 CAPN2P17655 700 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 PLA2G4AP47712 749 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 GNAQP50148 359 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 UBASH3AP57075 661 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 TUBB4BP68371 445 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 AMPD2Q01433 879 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 TFAP4Q01664 338 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 PIK3AP1Q6ZUJ8 805 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 ZMYND12Q9H0C1 365 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 KIF20AO95235 890 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 FGFR1OPO95684 399 aaKnown RBP10.37□□□□□ -0.75
RPA1-201ENST00000254719 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 DHX58Q96C10 678 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 GJD4Q96KN9 370 aaPredicted RBP10.37□□□□□ -0.75
RPA1-201ENST00000254719 BARHL2Q9NY43 387 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 TRIM10Q9UDY6 481 aa10.37□□□□□ -0.75
RPA1-201ENST00000254719 MYO1BO43795 1136 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 SLC37A4O43826 429 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 TNNT3P45378 269 aaPredicted RBP10.36□□□□□ -0.75
RPA1-201ENST00000254719 SPAG1Q07617 926 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 TTI2Q6NXR4 508 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 KARSQ15046 597 aaKnown RBP10.36□□□□□ -0.75
RPA1-201ENST00000254719 IGSF22Q8N9C0 903 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 RAB34Q9BZG1 259 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 CCNL1Q9UK58 526 aaPredicted RBP10.36□□□□□ -0.75
RPA1-201ENST00000254719 PCDHA2Q9Y5H9 948 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 DGKHQ86XP1 1220 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 TGFBRAP1Q8WUH2 860 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 HAS1Q92839 578 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 CEP95Q96GE4 821 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 RUFY1Q96T51 708 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 CHP1Q99653 195 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 SRRTQ9BXP5 876 aaKnown RBP10.36□□□□□ -0.75
RPA1-201ENST00000254719 RIOX1Q9H6W3 641 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 TMEM260Q9NX78 707 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 LIMA1Q9UHB6 759 aaKnown RBP10.36□□□□□ -0.75
RPA1-201ENST00000254719 PPP2R2CQ9Y2T4 447 aa10.36□□□□□ -0.75
RPA1-201ENST00000254719 MCM3P25205 808 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 KRT2P35908 639 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 EPS15P42566 896 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 KRT31Q15323 416 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 CTAGE1Q96RT6 745 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
RPA1-201ENST00000254719 PCP11498 1178 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms