RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CCDC148Q8NFR7 591 aa21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 PSMD1Q99460 953 aa21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 DDX4Q9NQI0 724 aaKnown RBP21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 EIF6P56537 245 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 TBX2Q13207 712 aaPredicted RBP21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 ARL6IP4Q66PJ3 421 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 HHIPL2Q6UWX4 724 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 TMEM139Q8IV31 216 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 DAGLBQ8NCG7 672 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 NLGN2Q8NFZ4 835 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 UBA5Q9GZZ9 404 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 CTNND2Q9UQB3 1225 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 ADAMTSL1Q8N6G6 1762 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 NRDCO43847 1150 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 LONP1P36776 959 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 NAPAP54920 295 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 ADKP55263 362 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 SPATA1Q5VX52 437 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 APTXQ7Z2E3 356 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 SPZ1Q9BXG8 430 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 USP40Q9NVE5 1235 aa21.17■□□□□ 0.98
PDLIM4-201ENST00000253754 TEX33O43247 280 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 CRKP46108 304 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 NCBP1Q09161 790 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 SPECC1LQ69YQ0 1117 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 PLIN2Q99541 437 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 MYH1P12882 1939 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 FRMPD2Q68DX3 1309 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 KCNJ6P48051 423 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 FKBP1AP62942 108 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 DHX8Q14562 1220 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 DALRD3Q5D0E6 543 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 APOBEC3HQ6NTF7 200 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 PIGSQ96S52 555 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 MAP7D2Q96T17 732 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 LZTS2Q9BRK4 669 aa21.16■□□□□ 0.98
PDLIM4-201ENST00000253754 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 NR1I3Q14994 352 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 DTHD1Q6ZMT9 781 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 LRRC47Q8N1G4 583 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 PCDHAC2Q9Y5I4 1007 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 A0A1B0GTH6 734 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 SLURP2P0DP57 97 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 AKR1B1P15121 316 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 STAT6P42226 847 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 RRAGBQ5VZM2 374 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 CDC42EP5Q6NZY7 148 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 SYT10Q6XYQ8 523 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 TC2NQ8N9U0 490 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 ZMYND12Q9H0C1 365 aa21.15■□□□□ 0.98
PDLIM4-201ENST00000253754 SMCO2A6NFE2 343 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 GTPBP6O43824 516 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 NAALADL2Q58DX5 795 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 CDKAL1Q5VV42 579 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 KIF18AQ8NI77 898 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 SPON1Q9HCB6 807 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 DISC1Q9NRI5 854 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 MAPK8IP1Q9UQF2 711 aa21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 ZNF646O15015 1829 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-201ENST00000253754 LETM2Q2VYF4 491 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 SOGA3Q5TF21 947 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 GALNT17Q6IS24 598 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 LRRC15Q8TF66 581 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 ANKRD7Q92527 254 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 RRP36Q96EU6 259 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 ZDHHC15Q96MV8 337 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 FOCADQ5VW36 1801 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 TXLNAP40222 546 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 RASSF8Q8NHQ8 419 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 GDAQ9Y2T3 454 aa21.13■□□□□ 0.97
PDLIM4-201ENST00000253754 RAD17O75943 681 aa21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 RPN1P04843 607 aaKnown RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 PDHBP11177 359 aa21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 GABPAQ06546 454 aa21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 BAG1Q99933 345 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 MTMR4Q9NYA4 1195 aa21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 SEC63Q9UGP8 760 aaKnown RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 ZNF215Q9UL58 517 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 V9GYY5 206 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 CCNT1O60563 726 aaKnown RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 NOVP48745 357 aa21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 CT47A1Q5JQC4 288 aaPredicted RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 MTERF4Q7Z6M4 381 aaKnown RBP21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 MRIQ9BWK5 157 aa21.12■□□□□ 0.97
PDLIM4-201ENST00000253754 PYM1Q9BRP8 204 aaKnown RBP21.11■□□□□ 0.97
PDLIM4-201ENST00000253754 TMEM260Q9NX78 707 aa21.11■□□□□ 0.97
PDLIM4-201ENST00000253754 BIN2Q9UBW5 565 aaPredicted RBP21.11■□□□□ 0.97
PDLIM4-201ENST00000253754 ADD3Q9UEY8 706 aaKnown RBP21.11■□□□□ 0.97
PDLIM4-201ENST00000253754 JAKMIP3Q5VZ66 844 aa21.11■□□□□ 0.97
PDLIM4-201ENST00000253754 REXO1L1PQ8IX06 675 aa21.11■□□□□ 0.97
PDLIM4-201ENST00000253754 COL4A5P29400 1685 aa21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 CCT6AP40227 531 aaKnown RBP21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 UBA7P41226 1012 aa21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 CACNB3P54284 484 aa21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 HDLBPQ00341 1268 aaKnown RBP21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 NFIAQ12857 509 aa21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 NONOQ15233 471 aaKnown RBP eCLIP21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 TOGARAM2Q6ZUX3 1019 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms