RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SNAPC2Q13487 334 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 CST9Q5W186 159 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 MCTP2Q6DN12 878 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 CCDC84Q86UT8 332 aaPredicted RBP14.9□□□□□ -0.02
LSM8-201ENST00000249299 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 BICD2Q8TD16 824 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 OPTNQ96CV9 577 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 HHIPL1Q96JK4 782 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 GBP4Q96PP9 640 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 PIGSQ96S52 555 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 SLF1Q9BQI6 1058 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 AMNQ9BXJ7 453 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 RANBP17Q9H2T7 1088 aaKnown RBP14.9□□□□□ -0.02
LSM8-201ENST00000249299 ELP3Q9H9T3 547 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 HOXC10Q9NYD6 342 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
LSM8-201ENST00000249299 ATAD5Q96QE3 1844 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 IRF6O14896 467 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 SLC16A2P36021 539 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 OAZ1P54368 228 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 HMGCS2P54868 508 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
LSM8-201ENST00000249299 RESTQ13127 1097 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 PABPC4Q13310 644 aaKnown RBP eCLIP14.89□□□□□ -0.031e-11■■□□□ 13.9
LSM8-201ENST00000249299 COG2Q14746 738 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 ZYXQ15942 572 aaKnown RBP14.89□□□□□ -0.03
LSM8-201ENST00000249299 WWC2Q6AWC2 1192 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 CATSPERGQ6ZRH7 1159 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 RASGRP2Q7LDG7 609 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 SAMD3Q8N6K7 520 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 TNPO1Q92973 898 aaKnown RBP14.89□□□□□ -0.03
LSM8-201ENST00000249299 OTUD5Q96G74 571 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 CLMNQ96JQ2 1002 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 NUP88Q99567 741 aaPredicted RBP14.89□□□□□ -0.03
LSM8-201ENST00000249299 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
LSM8-201ENST00000249299 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 VAT1LQ9HCJ6 419 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 ISY1Q9ULR0 285 aaKnown RBP14.89□□□□□ -0.03
LSM8-201ENST00000249299 ADAMTS5Q9UNA0 930 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 SLC45A1Q9Y2W3 748 aa14.89□□□□□ -0.03
LSM8-201ENST00000249299 STXBP3O00186 592 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 ATP2A1O14983 1001 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 GTF2A2P52657 109 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 NLRP5P59047 1200 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 CDC37Q16543 378 aaPredicted RBP14.88□□□□□ -0.03
LSM8-201ENST00000249299 QRICH1Q2TAL8 776 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 MOB2Q70IA6 237 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 HEATR3Q7Z4Q2 680 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 FBXO11Q86XK2 927 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 AIFM3Q96NN9 605 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 C6orf50Q9HD87 102 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
LSM8-201ENST00000249299 PPFIA3O75145 1194 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 FLOT1O75955 427 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 CETPP11597 493 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 KRT2P35908 639 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 MRPL12P52815 198 aaKnown RBP14.87□□□□□ -0.03
LSM8-201ENST00000249299 NAPAP54920 295 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 LBX2Q6XYB7 198 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
LSM8-201ENST00000249299 GTF3C2Q8WUA4 911 aaPredicted RBP14.87□□□□□ -0.03
LSM8-201ENST00000249299 TANGO6Q9C0B7 1094 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 SLC38A10Q9HBR0 1119 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 PCDHA4Q9UN74 947 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 AGTPBP1Q9UPW5 1226 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
LSM8-201ENST00000249299 ZBED4O75132 1171 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 ICAM1P05362 532 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 PTMSP20962 102 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 GNL2Q13823 731 aaKnown RBP14.86□□□□□ -0.03
LSM8-201ENST00000249299 NPY5RQ15761 445 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 CSPP1Q1MSJ5 1256 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 SPRYD7Q5W111 196 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 MCTP1Q6DN14 999 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 SAPCD2Q86UD0 394 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 NOSTRINQ8IVI9 506 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 BLIDQ8IZY5 108 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 KIFC2Q96AC6 838 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 WNK4Q96J92 1243 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 ZNF396Q96N95 335 aaPredicted RBP14.86□□□□□ -0.03
LSM8-201ENST00000249299 ZCCHC17Q9NP64 241 aaKnown RBP14.86□□□□□ -0.03
LSM8-201ENST00000249299 MAP3K20Q9NYL2 800 aaKnown RBP14.86□□□□□ -0.03
LSM8-201ENST00000249299 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 PCDHA1Q9Y5I3 950 aa14.86□□□□□ -0.03
LSM8-201ENST00000249299 PHIPQ8WWQ0 1821 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 hCG_1642624A0A1W2PR95 340 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 GOLGA6L22H0YM25 854 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 M0R2N6 131 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 VWA5AO00534 786 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 TRAPPC10P48553 1259 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 HUNKP57058 714 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 INHBEP58166 350 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 RIC8AQ9NPQ8 531 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms