RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 ALAS1P13196 640 aa24.84■■□□□ 1.57
HCFC1R1-201ENST00000248089 SYDE2Q5VT97 1194 aa24.84■■□□□ 1.57
HCFC1R1-201ENST00000248089 CENPQQ7L2Z9 268 aaPredicted RBP24.84■■□□□ 1.57
HCFC1R1-201ENST00000248089 KRT23Q9C075 422 aa24.84■■□□□ 1.57
HCFC1R1-201ENST00000248089 CNNM2Q9H8M5 875 aa24.84■■□□□ 1.57
HCFC1R1-201ENST00000248089 DNAH12Q6ZR08 3092 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 DNAJC25-GNG10A0A024R161 153 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 MYCNP04198 464 aaPredicted RBP24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 NT5C2P49902 561 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 PTH1RQ03431 593 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 SKAP1Q86WV1 359 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 C7orf61Q8IZ16 206 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 ZSCAN10Q96SZ4 725 aaPredicted RBP24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 CCPG1Q9ULG6 757 aa24.83■■□□□ 1.57
HCFC1R1-201ENST00000248089 TAL1P17542 331 aaPredicted RBP24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 ZNF543Q08ER8 600 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 CCDC178Q5BJE1 867 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 TRERF1Q96PN7 1200 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 UBAC1Q9BSL1 405 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 KAT14Q9H8E8 782 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 ZSWIM5Q9P217 1185 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 CNPY2Q9Y2B0 182 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 TNKSO95271 1327 aa24.82■■□□□ 1.56
HCFC1R1-201ENST00000248089 LCTP09848 1927 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 MYH6P13533 1939 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 SGSM2O43147 1006 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 COL6A1P12109 1028 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 TKFCQ3LXA3 575 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 BTNL9Q6UXG8 535 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 DGKHQ86XP1 1220 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 PNMA1Q8ND90 353 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 RANBP17Q9H2T7 1088 aaKnown RBP24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 NRBP1Q9UHY1 535 aa24.81■■□□□ 1.56
HCFC1R1-201ENST00000248089 ICAM1P05362 532 aa24.8■■□□□ 1.56
HCFC1R1-201ENST00000248089 GJC2Q5T442 439 aaPredicted RBP24.8■■□□□ 1.56
HCFC1R1-201ENST00000248089 ENAHQ8N8S7 591 aaPredicted RBP24.8■■□□□ 1.56
HCFC1R1-201ENST00000248089 A1CFQ9NQ94 594 aaKnown RBP24.8■■□□□ 1.56
HCFC1R1-201ENST00000248089 U3KPZ7 1027 aaPredicted RBP24.8■■□□□ 1.56
HCFC1R1-201ENST00000248089 SYNGAP1Q96PV0 1343 aa24.8■■□□□ 1.56
HCFC1R1-201ENST00000248089 POTEB2H3BUK9 544 aa24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 DNM1LO00429 736 aa24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 GOLGA8HP0CJ92 632 aa24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 SNHG28P0DPA3 235 aa24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 MUM1L1Q5H9M0 696 aa24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 CHRDL2Q6WN34 429 aa24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 MSL3Q8N5Y2 521 aaKnown RBP24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 SENP6Q9GZR1 1112 aaPredicted RBP24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 ZHX1Q9UKY1 873 aaPredicted RBP24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 COLQQ9Y215 455 aaPredicted RBP24.79■■□□□ 1.56
HCFC1R1-201ENST00000248089 LRRC37A2A6NM11 1700 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 KBTBD13C9JR72 458 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 CYP21A2P08686 494 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 RARBP10826 455 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 CNTN2Q02246 1040 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 TRDNQ13061 729 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 ZNF467Q7Z7K2 595 aaPredicted RBP24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 ARRDC4Q8NCT1 418 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 FGD4Q96M96 766 aa24.78■■□□□ 1.56
HCFC1R1-201ENST00000248089 SNAI1O95863 264 aaPredicted RBP24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 ZNF865P0CJ78 1059 aaPredicted RBP24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 AKR1A1P14550 325 aa24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 GPATCH4Q5T3I0 446 aaKnown RBP24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 MAMDC4Q6UXC1 1216 aa24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 NSMFQ6X4W1 530 aa24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 CYB5R4Q7L1T6 521 aa24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 LENG1Q96BZ8 264 aaPredicted RBP24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 XPNPEP3Q9NQH7 507 aa24.77■■□□□ 1.56
HCFC1R1-201ENST00000248089 LRRC26Q2I0M4 334 aa24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 HABP4Q5JVS0 413 aaKnown RBP24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 IFIT1BQ5T764 474 aaKnown RBP24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 ARMCX2Q7L311 632 aa24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 ANKS1AQ92625 1134 aa24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 CPVLQ9H3G5 476 aa24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 ZMYND8Q9ULU4 1186 aaPredicted RBP24.76■■□□□ 1.55
HCFC1R1-201ENST00000248089 ATN1P54259 1190 aaPredicted RBP24.75■■□□□ 1.55
HCFC1R1-201ENST00000248089 KIAA1211Q6ZU35 1233 aa24.75■■□□□ 1.55
HCFC1R1-201ENST00000248089 RALYLQ86SE5 291 aaKnown RBP24.75■■□□□ 1.55
HCFC1R1-201ENST00000248089 FAM133AQ8N9E0 248 aa24.75■■□□□ 1.55
HCFC1R1-201ENST00000248089 RBM8AQ9Y5S9 174 aaKnown RBP24.75■■□□□ 1.55
HCFC1R1-201ENST00000248089 TAF6LQ9Y6J9 622 aa24.75■■□□□ 1.55
HCFC1R1-201ENST00000248089 PGK1P00558 417 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 LRRC41Q15345 812 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 CCDC144CPQ8IYA2 1237 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 CCDC136Q96JN2 1154 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 UBA5Q9GZZ9 404 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 CYP39A1Q9NYL5 469 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 TRIOBPQ9H2D6 2365 aa24.74■■□□□ 1.55
HCFC1R1-201ENST00000248089 SOWAHBA6NEL2 793 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 E7EWF7 191 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 NFIBO00712 420 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 SYN1P17600 705 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 ACVR2BQ13705 512 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 ASPRV1Q53RT3 343 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 MAP4K1Q92918 833 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 ESYT1Q9BSJ8 1104 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 FAM184BQ9ULE4 1060 aa24.73■■□□□ 1.55
HCFC1R1-201ENST00000248089 RANBP2P49792 3224 aaKnown RBP24.72■■□□□ 1.55
HCFC1R1-201ENST00000248089 DHX16O60231 1041 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms