RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 STAMQ92783 540 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
DDX49-201ENST00000247003 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
DDX49-201ENST00000247003 TMEM232C9JQI7 657 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 RIOK3O14730 519 aaKnown RBP17.09■□□□□ 0.33
DDX49-201ENST00000247003 ECE2O60344 883 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 SNHG28P0DPA3 235 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 SHMT1P34896 483 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 CUL4BQ13620 913 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 SPECC1LQ69YQ0 1117 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 APOBEC3HQ6NTF7 200 aaKnown RBP17.09■□□□□ 0.33
DDX49-201ENST00000247003 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 CNKSR1Q969H4 720 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 CCSER1Q9C0I3 900 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
DDX49-201ENST00000247003 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
DDX49-201ENST00000247003 CTNND2Q9UQB3 1225 aa17.09■□□□□ 0.33
DDX49-201ENST00000247003 USP27XA6NNY8 438 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 RRP9O43818 475 aaKnown RBP17.08■□□□□ 0.33
DDX49-201ENST00000247003 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.33
DDX49-201ENST00000247003 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.33
DDX49-201ENST00000247003 ATP2B2Q01814 1243 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 CCDC96Q2M329 555 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.33
DDX49-201ENST00000247003 MTERF4Q7Z6M4 381 aaKnown RBP17.08■□□□□ 0.33
DDX49-201ENST00000247003 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 MRIQ9BWK5 157 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.33
DDX49-201ENST00000247003 GREB1LQ9C091 1923 aaPredicted RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 CD44P16070 742 aaKnown RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 STX17P56962 302 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 SEMA3FQ13275 785 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 NYAP1Q6ZVC0 841 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 TBCKQ8TEA7 893 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 PPP1R3GB7ZBB8 358 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 TUBB4AP04350 444 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 CDC25AP30304 524 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 PAK1Q13153 545 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 STIM1Q13586 685 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 CABP7Q86V35 215 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 BIN2Q9UBW5 565 aaPredicted RBP17.07■□□□□ 0.32
DDX49-201ENST00000247003 RWDD2AQ9UIY3 292 aa17.07■□□□□ 0.32
DDX49-201ENST00000247003 PNMA6FA0A0J9YX94 578 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 A0A1B0GTH6 734 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 SPAG1Q07617 926 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 NFIAQ12857 509 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 INTS13Q9NVM9 706 aa17.06■□□□□ 0.32
DDX49-201ENST00000247003 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
DDX49-201ENST00000247003 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
DDX49-201ENST00000247003 TMEM266Q2M3C6 531 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 DACT2Q5SW24 774 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 E4F1Q66K89 784 aaPredicted RBP17.05■□□□□ 0.32
DDX49-201ENST00000247003 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 CLEC10AQ8IUN9 316 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 PPP1R13BQ96KQ4 1090 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 MED15Q96RN5 788 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 PI4KBQ9UBF8 816 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 PP2D1A8MPX8 630 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 ARHGAP6O43182 974 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 NR1I3Q14994 352 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 CDKAL1Q5VV42 579 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 CC2D2BQ6DHV5 1058 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 ADGRF4Q8IZF3 695 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 COA7Q96BR5 231 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 CALML4Q96GE6 196 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
DDX49-201ENST00000247003 ZSCAN12O43309 604 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 TCP10Q12799 353 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 TBX2Q13207 712 aaPredicted RBP17.04■□□□□ 0.32
DDX49-201ENST00000247003 KCNB1Q14721 858 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 CERKLQ49MI3 558 aaPredicted RBP17.04■□□□□ 0.32
DDX49-201ENST00000247003 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 CUL5Q93034 780 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 MTRQ99707 1265 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
DDX49-201ENST00000247003 STK32BQ9NY57 414 aa17.04■□□□□ 0.32
DDX49-201ENST00000247003 TPM1P09493 284 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 AMPD3Q01432 767 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 CALCRLQ16602 461 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 PPFIBP1Q86W92 1011 aa17.03■□□□□ 0.32
DDX49-201ENST00000247003 BAG1Q99933 345 aaPredicted RBP17.03■□□□□ 0.32
DDX49-201ENST00000247003 TMX1Q9H3N1 280 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms