RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 SNX17Q15036 470 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 RCSD1Q6JBY9 416 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 SH3RF1Q7Z6J0 888 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 STAG1Q8WVM7 1258 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 SLC5A4Q9NY91 659 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 MCM3APO60318 1980 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 COL6A3P12111 3177 aa19.09■□□□□ 0.65
CLPP-201ENST00000245816 MYADML2A6NDP7 307 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 SOWAHBA6NEL2 793 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 RANBP6O60518 1105 aaKnown RBP19.08■□□□□ 0.64
CLPP-201ENST00000245816 PTGS1P23219 599 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 CCSAPQ6IQ19 270 aaPredicted RBP19.08■□□□□ 0.64
CLPP-201ENST00000245816 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
CLPP-201ENST00000245816 ARRDC4Q8NCT1 418 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 RUFY2Q8WXA3 655 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 NRBP1Q9UHY1 535 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 STX8Q9UNK0 236 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 LTBP2Q14767 1821 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 LCTP09848 1927 aa19.08■□□□□ 0.64
CLPP-201ENST00000245816 RAD50Q92878 1312 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 TSPY2A6NKD2 308 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 PLA2G6O60733 806 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 ITGB8P26012 769 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 COPB2P35606 906 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 TRIM60Q495X7 471 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 MUM1L1Q5H9M0 696 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 PURBQ96QR8 312 aaKnown RBP19.07■□□□□ 0.64
CLPP-201ENST00000245816 TMEM47Q9BQJ4 181 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 DSCC1Q9BVC3 393 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 HOMER2Q9NSB8 354 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 PRR12Q9ULL5 1215 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 PHF24Q9UPV7 400 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
CLPP-201ENST00000245816 TRIM43BA6NCK2 446 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 CTAGE5O15320 804 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
CLPP-201ENST00000245816 SLC1A4P43007 532 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 OAZ1P54368 228 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 TMEM63BQ5T3F8 832 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 FAM133AQ8N9E0 248 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 KLHDC9Q8NEP7 349 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 TRIM43Q96BQ3 446 aaPredicted RBP19.06■□□□□ 0.64
CLPP-201ENST00000245816 DDX11Q96FC9 970 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 A1CFQ9NQ94 594 aaKnown RBP19.06■□□□□ 0.64
CLPP-201ENST00000245816 XPNPEP3Q9NQH7 507 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 MTMR7Q9Y216 660 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 ATP11BQ9Y2G3 1177 aa19.06■□□□□ 0.64
CLPP-201ENST00000245816 SYNGAP1Q96PV0 1343 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 SLC16A2P36021 539 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 STAT2P52630 851 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 ZNF467Q7Z7K2 595 aaPredicted RBP19.05■□□□□ 0.64
CLPP-201ENST00000245816 TDHQ8IZJ6 230 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 CHST13Q8NET6 341 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 UBE2OQ9C0C9 1292 aaKnown RBP19.05■□□□□ 0.64
CLPP-201ENST00000245816 TCP11L1Q9NUJ3 509 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.05■□□□□ 0.64
CLPP-201ENST00000245816 CTNNA3Q9UI47 895 aa19.05■□□□□ 0.64
CLPP-201ENST00000245816 NEDD4P46934 1319 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 LRIT3Q3SXY7 679 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 RRP12Q5JTH9 1297 aaKnown RBP19.04■□□□□ 0.64
CLPP-201ENST00000245816 CCDC174Q6PII3 467 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 BTNL9Q6UXG8 535 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 FAM160B2Q86V87 743 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 ANKRD35Q8N283 1001 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 MSL3Q8N5Y2 521 aaKnown RBP19.04■□□□□ 0.64
CLPP-201ENST00000245816 RNF41Q9H4P4 317 aaPredicted RBP19.04■□□□□ 0.64
CLPP-201ENST00000245816 PDLIM7Q9NR12 457 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 RNF146Q9NTX7 359 aa19.04■□□□□ 0.64
CLPP-201ENST00000245816 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.03■□□□□ 0.64
CLPP-201ENST00000245816 KBTBD13C9JR72 458 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 RARBP10826 455 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 AKR1A1P14550 325 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 CHMLP26374 656 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 TLE2Q04725 743 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 ACVR2BQ13705 512 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 C1orf53Q5VUE5 145 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 Q7L0L9 218 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 ARMCX2Q7L311 632 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 CHURC1Q8WUH1 139 aa19.03■□□□□ 0.64
CLPP-201ENST00000245816 FRMPD2Q68DX3 1309 aaPredicted RBP19.02■□□□□ 0.64
CLPP-201ENST00000245816 A0A1W2PQ45 241 aaPredicted RBP19.02■□□□□ 0.64
CLPP-201ENST00000245816 A0A1W2PQY0 241 aa19.02■□□□□ 0.64
CLPP-201ENST00000245816 ZNF213O14771 459 aa19.02■□□□□ 0.64
CLPP-201ENST00000245816 CCDC144BQ3MJ40 725 aa19.02■□□□□ 0.64
CLPP-201ENST00000245816 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.64
CLPP-201ENST00000245816 TRERF1Q96PN7 1200 aa19.02■□□□□ 0.64
CLPP-201ENST00000245816 RANBP17Q9H2T7 1088 aaKnown RBP19.02■□□□□ 0.64
CLPP-201ENST00000245816 ZHX1Q9UKY1 873 aaPredicted RBP19.02■□□□□ 0.64
CLPP-201ENST00000245816 LRRC37A2A6NM11 1700 aa19.02■□□□□ 0.63
CLPP-201ENST00000245816 SNHG28P0DPA3 235 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 ALAS1P13196 640 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 EPHB4P54760 987 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 C9orf50Q5SZB4 431 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 MFSD6Q6ZSS7 791 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 DCAF4Q8WV16 495 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 ZKSCAN3Q9BRR0 538 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 CPVLQ9H3G5 476 aa19.01■□□□□ 0.63
CLPP-201ENST00000245816 ACAD9Q9H845 621 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms