RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DAPK3O43293 454 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 GSTO1P78417 241 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 TRIM49BA6NDI0 452 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 SMCO2A6NFE2 343 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 CHGBP05060 677 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 LDHCP07864 332 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 ATP2A2P16615 1042 aaKnown RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 GYG1P46976 350 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 RILPL1Q5EBL4 403 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 SCYL3Q8IZE3 742 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 TRIM10Q9UDY6 481 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 CTTNBP2Q8WZ74 1663 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 ARHGEF35A5YM69 484 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 FOXN1O15353 648 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 LRRN2O75325 713 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 HSPD1P10809 573 aaKnown RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 PDIA3P30101 505 aaKnown RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 RUFY4Q6ZNE9 571 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 NOSTRINQ8IVI9 506 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 DACT3Q96B18 629 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 NGLY1Q96IV0 654 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 CFAP57Q96MR6 1250 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 RGS12O14924 1447 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 ZNF608Q9ULD9 1512 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 DPF2Q92785 391 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 VTI1AQ96AJ9 217 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 RABGAP1Q9Y3P9 1069 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 NSMFQ6X4W1 530 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 TUBB4AP04350 444 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 GUCY2CP25092 1073 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 ADALQ6DHV7 355 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 IRX2Q9BZI1 471 aaPredicted RBP8.26□□□□□ -1.09
RIF1-201ENST00000243326 IMPG2Q9BZV3 1241 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 BCAMP50895 628 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 PANK4Q9NVE7 773 aa8.26□□□□□ -1.09
RIF1-201ENST00000243326 KIF3CO14782 793 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 GFPT2O94808 682 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 KIRREL3Q8IZU9 778 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 PLCB1Q9NQ66 1216 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 TFR2Q9UP52 801 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 SSX2IPQ9Y2D8 614 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 ATICP31939 592 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CCDC127Q96BQ5 260 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 ZMYM6O95789 1325 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 ITSN2Q9NZM3 1697 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 MYBL1P10243 752 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 ADCY7P51828 1080 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 IFRD2Q12894 506 aaPredicted RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 NKX1-1Q15270 411 aaPredicted RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 KCTD19Q17RG1 926 aaPredicted RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 RIN2Q8WYP3 895 aaPredicted RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 USP44Q9H0E7 712 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 SMYD3Q9H7B4 428 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CCDC89Q8N998 374 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 PDZD8Q8NEN9 1154 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CCT6BQ92526 530 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 FAM102BQ5T8I3 360 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 IFT122Q9HBG6 1241 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CFBP00751 764 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 SATB1Q01826 763 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 TRIM14Q14142 442 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 LLPHQ9BRT6 129 aaKnown RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 EIF2AK4Q9P2K8 1649 aaKnown RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 WDR44Q5JSH3 913 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 MAGI2Q86UL8 1455 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 PPFIA4O75335 1185 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CCDC197Q8NCU1 140 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 SLC12A1Q13621 1099 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 SYCP2LQ5T4T6 812 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 FAF1Q9UNN5 650 aaPredicted RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 ZBBXA8MT70 800 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 ZNF211Q13398 564 aaPredicted RBP8.25□□□□□ -1.09
RIF1-201ENST00000243326 TCP11X2Q5H9J9 407 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 DCUN1D2Q6PH85 259 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
RIF1-201ENST00000243326 CTNND1O60716 968 aaKnown RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 FAM133AQ8N9E0 248 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 RAB3IPQ96QF0 476 aaPredicted RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 VCXQ9H320 206 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 CSPG5O95196 566 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 MTMR3Q13615 1198 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 DPP8Q6V1X1 898 aaPredicted RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 PALM2Q8IXS6 379 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 KDRP35968 1356 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 UBN2Q6ZU65 1347 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 PABPN1LA6NDY0 278 aaKnown RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 PRKAB2O43741 272 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 FGAP02671 866 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 CPVLQ9H3G5 476 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 CFLARO15519 480 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 GABPAQ06546 454 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 RESTQ13127 1097 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 PTGDRQ13258 359 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms