RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 NBPF9Q3BBW0 867 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 TATDN1Q6P1N9 297 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 VAT1LQ9HCJ6 419 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 COL2A1P02458 1487 aaPredicted RBP18.16■□□□□ 0.5
ITGA4-201ENST00000233573 SMCO2A6NFE2 343 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 ENTPD3O75355 529 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 TRIML1Q8N9V2 468 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 PAGE5Q96GU1 130 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 C6orf50Q9HD87 102 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 TMOD2Q9NZR1 351 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 CNTNAP1P78357 1384 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 GNA11P29992 359 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 DRC7Q8IY82 874 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 SMARCE1Q969G3 411 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 CSRNP1Q96S65 589 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 ZNF541Q9H0D2 1346 aa18.15■□□□□ 0.5
ITGA4-201ENST00000233573 LONP1P36776 959 aaKnown RBP18.14■□□□□ 0.5
ITGA4-201ENST00000233573 TNIP1Q15025 636 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 PPP4R3BQ5MIZ7 849 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 KRT25Q7Z3Z0 450 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 KIAA1524Q8TCG1 905 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 MKL1Q969V6 931 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 MYOZ2Q9NPC6 264 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 PYCARDQ9ULZ3 195 aa18.14■□□□□ 0.5
ITGA4-201ENST00000233573 WNT10BO00744 389 aa18.14■□□□□ 0.49
ITGA4-201ENST00000233573 GDF11O95390 407 aa18.14■□□□□ 0.49
ITGA4-201ENST00000233573 MYL5Q02045 173 aa18.14■□□□□ 0.49
ITGA4-201ENST00000233573 RBM26Q5T8P6 1007 aaKnown RBP18.14■□□□□ 0.49
ITGA4-201ENST00000233573 MTMR8Q96EF0 704 aa18.14■□□□□ 0.49
ITGA4-201ENST00000233573 JMJD4Q9H9V9 463 aa18.14■□□□□ 0.49
ITGA4-201ENST00000233573 GPCPD1Q9NPB8 672 aa18.14■□□□□ 0.49
ITGA4-201ENST00000233573 GMPSP49915 693 aaPredicted RBP18.13■□□□□ 0.49
ITGA4-201ENST00000233573 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 DPYDQ12882 1025 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 CERKLQ49MI3 558 aaPredicted RBP18.13■□□□□ 0.49
ITGA4-201ENST00000233573 PDXDC2PQ6P474 469 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 SIAH1Q8IUQ4 282 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 MLKLQ8NB16 471 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 ZBED3Q96IU2 234 aaPredicted RBP18.13■□□□□ 0.49
ITGA4-201ENST00000233573 SPTLC3Q9NUV7 552 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 FZD9O00144 591 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 LAD1O00515 517 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 PRPHP41219 470 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 JAG1P78504 1218 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 RRP1BQ14684 758 aaKnown RBP18.13■□□□□ 0.49
ITGA4-201ENST00000233573 NONOQ15233 471 aaKnown RBP eCLIP18.13■□□□□ 0.49
ITGA4-201ENST00000233573 GPATCH4Q5T3I0 446 aaKnown RBP18.13■□□□□ 0.49
ITGA4-201ENST00000233573 TTBK2Q6IQ55 1244 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 ILDR2Q71H61 639 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 ADGRF4Q8IZF3 695 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 MTMR14Q8NCE2 650 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 TMEM39BQ9GZU3 492 aa18.13■□□□□ 0.49
ITGA4-201ENST00000233573 PPP1R11O60927 126 aaPredicted RBP18.12■□□□□ 0.49
ITGA4-201ENST00000233573 TPM4P67936 248 aa18.12■□□□□ 0.49
ITGA4-201ENST00000233573 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
ITGA4-201ENST00000233573 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
ITGA4-201ENST00000233573 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
ITGA4-201ENST00000233573 PYM1Q9BRP8 204 aaKnown RBP18.12■□□□□ 0.49
ITGA4-201ENST00000233573 XPO4Q9C0E2 1151 aaKnown RBP18.12■□□□□ 0.49
ITGA4-201ENST00000233573 KANSL2Q9H9L4 492 aa18.12■□□□□ 0.49
ITGA4-201ENST00000233573 PNMA6FA0A0J9YX94 578 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 ATP1A3P13637 1013 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 EEF2P13639 858 aaKnown RBP18.11■□□□□ 0.49
ITGA4-201ENST00000233573 LMOD1P29536 600 aaPredicted RBP18.11■□□□□ 0.49
ITGA4-201ENST00000233573 AFMP43652 599 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 LRMPQ12912 555 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 MICALL2Q8IY33 904 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 C17orf53Q8N3J3 647 aaPredicted RBP18.11■□□□□ 0.49
ITGA4-201ENST00000233573 IQUBQ8NA54 791 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 FAM151AQ8WW52 585 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 CCDC34Q96HJ3 373 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 MED15Q96RN5 788 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 MTRQ99707 1265 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 ASTN2O75129 1339 aaPredicted RBP18.11■□□□□ 0.49
ITGA4-201ENST00000233573 MYO1BO43795 1136 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 SMC2O95347 1197 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
ITGA4-201ENST00000233573 SAMD7Q7Z3H4 446 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 REXO1Q8N1G1 1221 aaKnown RBP18.11■□□□□ 0.49
ITGA4-201ENST00000233573 COA7Q96BR5 231 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 IFNKQ9P0W0 207 aa18.11■□□□□ 0.49
ITGA4-201ENST00000233573 CASP1P29466 404 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 ZNF280AP59817 542 aaPredicted RBP18.1■□□□□ 0.49
ITGA4-201ENST00000233573 FANCCQ00597 558 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 SEPT2Q15019 361 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 PPP1R18Q6NYC8 613 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 DTHD1Q6ZMT9 781 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 NEK8Q86SG6 692 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 GSDMAQ96QA5 445 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 EDIL3O43854 480 aa18.1■□□□□ 0.49
ITGA4-201ENST00000233573 TBC1D10BQ4KMP7 808 aaPredicted RBP18.1■□□□□ 0.49
ITGA4-201ENST00000233573 TMEM179Q6ZVK1 233 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms