RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 KRT25Q7Z3Z0 450 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 NELFCDQ8IXH7 590 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 CXorf56Q9H5V9 222 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 B4DLN1 442 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 RFC1P35251 1148 aaPredicted RBP15.17■□□□□ 0.02
HCFC2-201ENST00000229330 POLE2P56282 527 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 PDE1CQ14123 709 aaPredicted RBP15.17■□□□□ 0.02
HCFC2-201ENST00000229330 P3H4Q92791 437 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 COG7P83436 770 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 TRAF1Q13077 416 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 PLS1Q14651 629 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 VPS37BQ9H9H4 285 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 PRDM15P57071 1507 aaPredicted RBP15.17■□□□□ 0.02
HCFC2-201ENST00000229330 MFAP3LO75121 409 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 PTPROQ16827 1216 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 USH1CQ9Y6N9 552 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 COBLO75128 1261 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 ARHGEF25Q86VW2 580 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
HCFC2-201ENST00000229330 SLC7A5Q01650 507 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 MUM1L1Q5H9M0 696 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 TBC1D7Q9P0N9 293 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 NOVA2Q9UNW9 492 aaKnown RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 KRT5P13647 590 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 CXCR5P32302 372 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 ACTN3Q08043 901 aaPredicted RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 SUFUQ9UMX1 484 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 ZNF532Q9HCE3 1301 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 CFAP61Q8NHU2 1237 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 POLR2FP61218 127 aaKnown RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 MAP3K21Q5TCX8 1036 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 ZNF804AQ7Z570 1209 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 TBC1D1Q86TI0 1168 aaPredicted RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 TEX11Q8IYF3 940 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 CNOT6LQ96LI5 555 aaKnown RBP15.16■□□□□ 0.02
HCFC2-201ENST00000229330 RILPQ96NA2 401 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 RUNDC3BQ96NL0 473 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 NUF2Q9BZD4 464 aa15.16■□□□□ 0.02
HCFC2-201ENST00000229330 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
HCFC2-201ENST00000229330 PRDM1O75626 825 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 SMYD4Q8IYR2 804 aaPredicted RBP15.15■□□□□ 0.02
HCFC2-201ENST00000229330 PPP1R9AQ9ULJ8 1098 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 ITGA6P23229 1130 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 STAT1P42224 750 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 HAUS3Q68CZ6 603 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
HCFC2-201ENST00000229330 AGTPBP1Q9UPW5 1226 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 ARHGAP42A6NI28 874 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 NDC80O14777 642 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 GNPATO15228 680 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 SH3TC1Q8TE82 1336 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 MOCS3O95396 460 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 LIN9Q5TKA1 542 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 GRAMD1CQ8IYS0 662 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 Q9H521 79 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 CD2APQ9Y5K6 639 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 COMMD10Q9Y6G5 202 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 AATKQ6ZMQ8 1374 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 KIF1BO60333 1816 aa15.15■□□□□ 0.02
HCFC2-201ENST00000229330 THAP12O43422 761 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 FGAP02671 866 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ARMCX5Q6P1M9 558 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 FAF1Q9UNN5 650 aaPredicted RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 TMEM232C9JQI7 657 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ABCB4P21439 1286 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 IL9RQ01113 521 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 LGSNQ5TDP6 509 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 NHEJ1Q9H9Q4 299 aaPredicted RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 PSD3Q9NYI0 1048 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ATP8A1Q9Y2Q0 1164 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 KCNQ3O43525 872 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ADAT2Q7Z6V5 191 aaKnown RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 MYOCDQ8IZQ8 938 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 LRRC8CQ8TDW0 803 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 TXLNGQ9NUQ3 528 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 BCAP29Q9UHQ4 241 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 KDRP35968 1356 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 BCRP11274 1271 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 SKIP12755 728 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 CCZ1BP86790 482 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 CCZ1P86791 482 aaPredicted RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 DHX9Q08211 1270 aaKnown RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 FANCBQ8NB91 859 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 GSDMBQ8TAX9 411 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms