RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 C16orf45Q96MC5 204 aaPredicted RBP21.69■■□□□ 1.06
YBX3-201ENST00000228251 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
YBX3-201ENST00000228251 G3V3G9 751 aa21.68■■□□□ 1.06
YBX3-201ENST00000228251 KARSQ15046 597 aaKnown RBP21.68■■□□□ 1.06
YBX3-201ENST00000228251 DCAF8Q5TAQ9 597 aa21.68■■□□□ 1.06
YBX3-201ENST00000228251 E4F1Q66K89 784 aaPredicted RBP21.68■■□□□ 1.06
YBX3-201ENST00000228251 LRRC15Q8TF66 581 aa21.68■■□□□ 1.06
YBX3-201ENST00000228251 CCDC17Q96LX7 622 aa21.68■■□□□ 1.06
YBX3-201ENST00000228251 SYNRGQ9UMZ2 1314 aa21.68■■□□□ 1.06
YBX3-201ENST00000228251 A0A1B0GTH6 734 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 PP2D1A8MPX8 630 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 CHRNA5P30532 468 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 TXLNAP40222 546 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 SLC15A2Q16348 729 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 PPP1R18Q6NYC8 613 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 SH3BP5LQ7L8J4 393 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 NEK8Q86SG6 692 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 KIAA0825Q8IV33 1275 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 BLZF1Q9H2G9 400 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 DHX36Q9H2U1 1008 aaKnown RBP21.67■■□□□ 1.06
YBX3-201ENST00000228251 JMJD4Q9H9V9 463 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 VAT1LQ9HCJ6 419 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 MYH7BA7E2Y1 1941 aa21.67■■□□□ 1.06
YBX3-201ENST00000228251 OR52Z1P0C646 297 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 SLURP2P0DP57 97 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 TNNT1P13805 278 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 EIF6P56537 245 aaKnown RBP21.66■■□□□ 1.06
YBX3-201ENST00000228251 NR1I3Q14994 352 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 TPD52L1Q16890 204 aaPredicted RBP21.66■■□□□ 1.06
YBX3-201ENST00000228251 SMYD4Q8IYR2 804 aaPredicted RBP21.66■■□□□ 1.06
YBX3-201ENST00000228251 REXO1Q8N1G1 1221 aaKnown RBP21.66■■□□□ 1.06
YBX3-201ENST00000228251 CNKSR1Q969H4 720 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 AK8Q96MA6 479 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 CAMKK2Q96RR4 588 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 KBTBD4Q9NVX7 518 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 SERPINA10Q9UK55 444 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 COL2A1P02458 1487 aaPredicted RBP21.66■■□□□ 1.06
YBX3-201ENST00000228251 PPP1R11O60927 126 aaPredicted RBP21.66■■□□□ 1.06
YBX3-201ENST00000228251 SOGA3Q5TF21 947 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 TMEM139Q8IV31 216 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 MKL1Q969V6 931 aa21.66■■□□□ 1.06
YBX3-201ENST00000228251 PNMA6FA0A0J9YX94 578 aa21.65■■□□□ 1.06
YBX3-201ENST00000228251 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
YBX3-201ENST00000228251 DDTLA6NHG4 134 aaPredicted RBP21.65■■□□□ 1.06
YBX3-201ENST00000228251 RIOK3O14730 519 aaKnown RBP21.65■■□□□ 1.06
YBX3-201ENST00000228251 STAT6P42226 847 aa21.65■■□□□ 1.06
YBX3-201ENST00000228251 HSP90AA4PQ58FG1 418 aa21.65■■□□□ 1.06
YBX3-201ENST00000228251 ZNF658Q5TYW1 1059 aaPredicted RBP21.65■■□□□ 1.06
YBX3-201ENST00000228251 TBCKQ8TEA7 893 aa21.65■■□□□ 1.06
YBX3-201ENST00000228251 ATRNL1Q5VV63 1379 aa21.65■■□□□ 1.06
YBX3-201ENST00000228251 RPN1P04843 607 aaKnown RBP21.64■■□□□ 1.06
YBX3-201ENST00000228251 MYL1P05976 194 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 PBX1P40424 430 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 SEMA3FQ13275 785 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 PPP4R3BQ5MIZ7 849 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 GPATCH4Q5T3I0 446 aaKnown RBP21.64■■□□□ 1.06
YBX3-201ENST00000228251 TATDN1Q6P1N9 297 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 ADGRF4Q8IZF3 695 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 CCDC112Q8NEF3 446 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 COA7Q96BR5 231 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 GPCPD1Q9NPB8 672 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 TMEM260Q9NX78 707 aa21.64■■□□□ 1.06
YBX3-201ENST00000228251 KLRC4O43908 158 aa21.64■■□□□ 1.05
YBX3-201ENST00000228251 CLK2P49760 499 aaKnown RBP21.64■■□□□ 1.05
YBX3-201ENST00000228251 LETM2Q2VYF4 491 aa21.64■■□□□ 1.05
YBX3-201ENST00000228251 TTBK2Q6IQ55 1244 aa21.64■■□□□ 1.05
YBX3-201ENST00000228251 MTMR9Q96QG7 549 aa21.64■■□□□ 1.05
YBX3-201ENST00000228251 RMND1Q9NWS8 449 aa21.64■■□□□ 1.05
YBX3-201ENST00000228251 BIN2Q9UBW5 565 aaPredicted RBP21.64■■□□□ 1.05
YBX3-201ENST00000228251 CCNT1O60563 726 aaKnown RBP21.63■■□□□ 1.05
YBX3-201ENST00000228251 CACNB3P54284 484 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 KCNB1Q14721 858 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 PTPN21Q16825 1174 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 JAKMIP3Q5VZ66 844 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 RRAGBQ5VZM2 374 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 CC2D2BQ6DHV5 1058 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 POTEAQ6S8J7 498 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 SIAH1Q8IUQ4 282 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 IGSF22Q8N9C0 903 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 CUEDC2Q9H467 287 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 RIC8AQ9NPQ8 531 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 NYAP2Q9P242 653 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 PI4KBQ9UBF8 816 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 ADD3Q9UEY8 706 aaKnown RBP21.63■■□□□ 1.05
YBX3-201ENST00000228251 RWDD2AQ9UIY3 292 aa21.63■■□□□ 1.05
YBX3-201ENST00000228251 CDK11BP21127 795 aaKnown RBP21.62■■□□□ 1.05
YBX3-201ENST00000228251 UBA7P41226 1012 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 ADCY7P51828 1080 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 STX17P56962 302 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 EZH2Q15910 746 aaKnown RBP21.62■■□□□ 1.05
YBX3-201ENST00000228251 AOC3Q16853 763 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
YBX3-201ENST00000228251 SPECC1LQ69YQ0 1117 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 KLHL10Q6JEL2 608 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 MMTAG2Q9BU76 263 aaKnown RBP21.62■■□□□ 1.05
YBX3-201ENST00000228251 MAGEF1Q9HAY2 307 aa21.62■■□□□ 1.05
YBX3-201ENST00000228251 YDJCA8MPS7 323 aa21.61■■□□□ 1.05
YBX3-201ENST00000228251 CTIFO43310 598 aaKnown RBP21.61■■□□□ 1.05
YBX3-201ENST00000228251 TC2NQ8N9U0 490 aa21.61■■□□□ 1.05
YBX3-201ENST00000228251 CTNND2Q9UQB3 1225 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms