RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 HMGCS2P54868 508 aa20.7■□□□□ 0.9
CBX1-201ENST00000225603 WDR46O15213 610 aaKnown RBP20.7■□□□□ 0.9
CBX1-201ENST00000225603 SAMD1Q6SPF0 538 aaPredicted RBP20.7■□□□□ 0.9
CBX1-201ENST00000225603 RASGRP4Q8TDF6 673 aa20.7■□□□□ 0.9
CBX1-201ENST00000225603 KIFC2Q96AC6 838 aa20.7■□□□□ 0.9
CBX1-201ENST00000225603 ZMYND12Q9H0C1 365 aa20.7■□□□□ 0.9
CBX1-201ENST00000225603 PCDHA4Q9UN74 947 aa20.7■□□□□ 0.9
CBX1-201ENST00000225603 USP14P54578 494 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 ANKRD13AQ8IZ07 590 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 CCDC148Q8NFR7 591 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 RRAGDQ9NQL2 400 aaPredicted RBP20.69■□□□□ 0.9
CBX1-201ENST00000225603 FEM1BQ9UK73 627 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 M0R2N6 131 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 PLA2G6O60733 806 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 CALML3P27482 149 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 TOB1P50616 345 aaPredicted RBP20.69■□□□□ 0.9
CBX1-201ENST00000225603 CCDC173Q0VFZ6 552 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 BLIDQ8IZY5 108 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 CHURC1Q8WUH1 139 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 LEO1Q8WVC0 666 aaPredicted RBP20.69■□□□□ 0.9
CBX1-201ENST00000225603 ZNF396Q96N95 335 aaPredicted RBP20.69■□□□□ 0.9
CBX1-201ENST00000225603 CLIC4Q9Y696 253 aa20.69■□□□□ 0.9
CBX1-201ENST00000225603 MYH15Q9Y2K3 1946 aa20.68■□□□□ 0.9
CBX1-201ENST00000225603 ANP32BQ92688 251 aaKnown RBP20.68■□□□□ 0.9
CBX1-201ENST00000225603 PPP1R9BQ96SB3 815 aa20.68■□□□□ 0.9
CBX1-201ENST00000225603 RPAP3Q9H6T3 665 aaPredicted RBP20.68■□□□□ 0.9
CBX1-201ENST00000225603 BRMS1Q9HCU9 246 aa20.68■□□□□ 0.9
CBX1-201ENST00000225603 UBE2HP62256 183 aa20.68■□□□□ 0.9
CBX1-201ENST00000225603 ARMC9Q7Z3E5 817 aa20.68■□□□□ 0.9
CBX1-201ENST00000225603 C19orf81C9J6K1 198 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 LDLRAD1Q5T700 205 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 FAM160B2Q86V87 743 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
CBX1-201ENST00000225603 DAGLBQ8NCG7 672 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 C12orf42Q96LP6 360 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 TANGO6Q9C0B7 1094 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 CFAP45Q9UL16 551 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 PCDHA6Q9UN73 950 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 PCDHA8Q9Y5H6 950 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
CBX1-201ENST00000225603 CSPP1Q1MSJ5 1256 aa20.66■□□□□ 0.9
CBX1-201ENST00000225603 TPRNQ4KMQ1 711 aa20.66■□□□□ 0.9
CBX1-201ENST00000225603 CCDC12Q8WUD4 166 aaPredicted RBP20.66■□□□□ 0.9
CBX1-201ENST00000225603 RANBP17Q9H2T7 1088 aaKnown RBP20.66■□□□□ 0.9
CBX1-201ENST00000225603 IRF6O14896 467 aa20.66■□□□□ 0.9
CBX1-201ENST00000225603 ATL3Q6DD88 541 aa20.66■□□□□ 0.9
CBX1-201ENST00000225603 FAM177A1Q8N128 213 aaPredicted RBP20.66■□□□□ 0.9
CBX1-201ENST00000225603 SCAND2PQ9GZW5 306 aaPredicted RBP20.66■□□□□ 0.9
CBX1-201ENST00000225603 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
CBX1-201ENST00000225603 RCOR1Q9UKL0 485 aa20.66■□□□□ 0.9
CBX1-201ENST00000225603 ESYT2A0FGR8 921 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 WNT7AO00755 349 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 USH1GQ495M9 461 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 GALNT17Q6IS24 598 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 CCDC174Q6PII3 467 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 PIK3AP1Q6ZUJ8 805 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 ERO1BQ86YB8 467 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 SLF1Q9BQI6 1058 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 C6orf50Q9HD87 102 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 SPDYE5A6NIY4 337 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 FLOT1O75955 427 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 ATP2B1P20020 1258 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 PPATQ06203 517 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 SH3D19Q5HYK7 790 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 ANO1Q5XXA6 986 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 FBXO11Q86XK2 927 aa20.65■□□□□ 0.9
CBX1-201ENST00000225603 TRIM44Q96DX7 344 aaPredicted RBP20.65■□□□□ 0.9
CBX1-201ENST00000225603 PRPF38AQ8NAV1 312 aaKnown RBP20.64■□□□□ 0.89
CBX1-201ENST00000225603 POLR3EQ9NVU0 708 aa20.64■□□□□ 0.89
CBX1-201ENST00000225603 TMEM260Q9NX78 707 aa20.64■□□□□ 0.89
CBX1-201ENST00000225603 BIN2Q9UBW5 565 aaPredicted RBP20.64■□□□□ 0.89
CBX1-201ENST00000225603 CELF2O95319 508 aaKnown RBP20.63■□□□□ 0.89
CBX1-201ENST00000225603 ITGBL1O95965 494 aaPredicted RBP20.63■□□□□ 0.89
CBX1-201ENST00000225603 GNA11P29992 359 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 ADCY7P51828 1080 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 SF3A1Q15459 793 aaKnown RBP20.63■□□□□ 0.89
CBX1-201ENST00000225603 PPP1R18Q6NYC8 613 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 TMOD4Q9NZQ9 345 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 PCDHB6Q9Y5E3 794 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 SMCHD1A6NHR9 2005 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 CCDC183Q5T5S1 534 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 RBM46Q8TBY0 533 aaKnown RBP20.63■□□□□ 0.89
CBX1-201ENST00000225603 OPTNQ96CV9 577 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 WNK4Q96J92 1243 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 PGBD1Q96JS3 809 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 RIC8AQ9NPQ8 531 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 PPP1R9AQ9ULJ8 1098 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 ELP1O95163 1332 aa20.63■□□□□ 0.89
CBX1-201ENST00000225603 GJA5P36382 358 aa20.62■□□□□ 0.89
CBX1-201ENST00000225603 PTPAQ15257 358 aa20.62■□□□□ 0.89
CBX1-201ENST00000225603 UBE2SQ16763 222 aa20.62■□□□□ 0.89
CBX1-201ENST00000225603 RILPL1Q5EBL4 403 aa20.62■□□□□ 0.89
CBX1-201ENST00000225603 JAKMIP3Q5VZ66 844 aa20.62■□□□□ 0.89
CBX1-201ENST00000225603 TSPY26PQ9H489 355 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms