RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 ANKRD13CQ8N6S4 541 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 SH3GL2Q99962 352 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 PPANQ9NQ55 473 aaKnown RBP15.84■□□□□ 0.13
SHPK-201ENST00000225519 NLRP5P59047 1200 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 ACTN3Q08043 901 aaPredicted RBP15.84■□□□□ 0.13
SHPK-201ENST00000225519 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
SHPK-201ENST00000225519 DDX17Q92841 729 aaKnown RBP15.84■□□□□ 0.13
SHPK-201ENST00000225519 TUBGCP2Q9BSJ2 902 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 HYOU1Q9Y4L1 999 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
SHPK-201ENST00000225519 LSP1P33241 339 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 CCDC40Q4G0X9 1142 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 CCDC170Q8IYT3 715 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
SHPK-201ENST00000225519 SCLT1Q96NL6 688 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 ORAI2Q96SN7 254 aa15.84■□□□□ 0.13
SHPK-201ENST00000225519 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.13
SHPK-201ENST00000225519 CHRM1P11229 460 aaPredicted RBP15.83■□□□□ 0.13
SHPK-201ENST00000225519 NR1D1P20393 614 aa15.83■□□□□ 0.13
SHPK-201ENST00000225519 EEF1GP26641 437 aaKnown RBP15.83■□□□□ 0.13
SHPK-201ENST00000225519 SEC24CP53992 1094 aa15.83■□□□□ 0.13
SHPK-201ENST00000225519 IFT20Q8IY31 132 aa15.83■□□□□ 0.13
SHPK-201ENST00000225519 CCDC47Q96A33 483 aaKnown RBP15.83■□□□□ 0.13
SHPK-201ENST00000225519 NUP58Q9BVL2 599 aa15.83■□□□□ 0.13
SHPK-201ENST00000225519 RNF41Q9H4P4 317 aaPredicted RBP15.83■□□□□ 0.13
SHPK-201ENST00000225519 EPB41L4AQ9HCS5 686 aaPredicted RBP15.83■□□□□ 0.13
SHPK-201ENST00000225519 MST1RQ04912 1400 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 TCP1P17987 556 aaKnown RBP15.83■□□□□ 0.12
SHPK-201ENST00000225519 PSEN1P49768 467 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 KLK7P49862 253 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 MMP14P50281 582 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 APBA1Q02410 837 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 NAA35Q5VZE5 725 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 MIGA1Q8NAN2 632 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 N4BP2L2Q92802 583 aaPredicted RBP15.83■□□□□ 0.12
SHPK-201ENST00000225519 RNF26Q9BY78 433 aaPredicted RBP15.83■□□□□ 0.12
SHPK-201ENST00000225519 NFU1Q9UMS0 254 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 UBR1Q8IWV7 1749 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 A0A1W2PQC6 194 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 ESYT3A0FGR9 886 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 ZBED6P86452 979 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 ODF2Q5BJF6 829 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 C2CD5Q86YS7 1000 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 OSBPL9Q96SU4 736 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 NOC4LQ9BVI4 516 aaKnown RBP15.83■□□□□ 0.12
SHPK-201ENST00000225519 KLC4Q9NSK0 619 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
SHPK-201ENST00000225519 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 ZPR1O75312 459 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 GPTP24298 496 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 CATIPQ7Z7H3 387 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 CREG2Q8IUH2 290 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 ZNF473Q8WTR7 871 aaKnown RBP15.82■□□□□ 0.12
SHPK-201ENST00000225519 BCCIPQ9P287 314 aaKnown RBP eCLIP15.82■□□□□ 0.12
SHPK-201ENST00000225519 WNT7AO00755 349 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 KIF1CO43896 1103 aaKnown RBP15.82■□□□□ 0.12
SHPK-201ENST00000225519 SKOR1P84550 965 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 GUCY2DQ02846 1103 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.126e-7■■■□□ 18.7
SHPK-201ENST00000225519 EPN3Q9H201 632 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 CAPN6Q9Y6Q1 641 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 ANKRD18BA2A2Z9 1011 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 NCK2O43639 380 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 ITGA6P23229 1130 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 EPB41L5Q9HCM4 733 aa15.82■□□□□ 0.12
SHPK-201ENST00000225519 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 C4BP0C0L5 1744 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 FSBPO95073 299 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 UQCRFS1P1P0C7P4 283 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 RNASE9P60153 205 aaKnown RBP15.81■□□□□ 0.12
SHPK-201ENST00000225519 PAK2Q13177 524 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 DHX37Q8IY37 1157 aaKnown RBP15.81■□□□□ 0.12
SHPK-201ENST00000225519 VEZTQ9HBM0 779 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 NFAT5O94916 1531 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 PPP1R37O75864 691 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 TNKSO95271 1327 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 CCT8L2Q96SF2 557 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.81■□□□□ 0.12
SHPK-201ENST00000225519 CYP27B1O15528 508 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 UBA7P41226 1012 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 NLRP14Q86W24 1093 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 MMRN2Q9H8L6 949 aa15.81■□□□□ 0.12
SHPK-201ENST00000225519 ABCC12Q96J65 1359 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 HEXIM1O94992 359 aaKnown RBP15.8■□□□□ 0.12
SHPK-201ENST00000225519 MAGEA1P43355 309 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 ALX1Q15699 326 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 CCDC178Q5BJE1 867 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 ESR2Q92731 530 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 ELF1P32519 619 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 PMS1P54277 932 aaKnown RBP15.8■□□□□ 0.12
SHPK-201ENST00000225519 HDLBPQ00341 1268 aaKnown RBP15.8■□□□□ 0.12
SHPK-201ENST00000225519 TDRD12Q587J7 1177 aaKnown RBP15.8■□□□□ 0.12
SHPK-201ENST00000225519 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
SHPK-201ENST00000225519 IRF2BP1Q8IU81 584 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 FAM207AQ9NSI2 230 aaPredicted RBP15.8■□□□□ 0.12
SHPK-201ENST00000225519 RTL9Q8NET4 1388 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 BUB1O43683 1085 aa15.8■□□□□ 0.12
SHPK-201ENST00000225519 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms