RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SH3BP5O60239 455 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 TBC1D9BQ66K14 1250 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 ARMCX5Q6P1M9 558 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 SLF1Q9BQI6 1058 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.85
CLIP2-201ENST00000223398 CEP104O60308 925 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 PSMC4P43686 418 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 STAT2P52630 851 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 ARHGEF6Q15052 776 aa20.39■□□□□ 0.85
CLIP2-201ENST00000223398 RBM6P78332 1123 aaKnown RBP20.38■□□□□ 0.85
CLIP2-201ENST00000223398 OSBP2Q969R2 916 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 SASH1O94885 1247 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 ABCB4P21439 1286 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 ADALQ6DHV7 355 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 RASEFQ8IZ41 740 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 NAP1L3Q99457 506 aaPredicted RBP20.38■□□□□ 0.85
CLIP2-201ENST00000223398 COA1Q9GZY4 146 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 RABGAP1Q9Y3P9 1069 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 FOSP01100 380 aaPredicted RBP20.38■□□□□ 0.85
CLIP2-201ENST00000223398 TMEM191BP0C7N4 346 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 BIRC2Q13490 618 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 SCYL2Q6P3W7 929 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 SMIM5Q71RC9 77 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 U2AF1L4Q8WU68 220 aaKnown RBP20.38■□□□□ 0.85
CLIP2-201ENST00000223398 NSMCE1Q8WV22 266 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 GJA10Q969M2 543 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 PNMA2Q9UL42 364 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 AOC3Q16853 763 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 LARSQ9P2J5 1176 aaKnown RBP20.38■□□□□ 0.85
CLIP2-201ENST00000223398 CLIC4Q9Y696 253 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 ABCC3O15438 1527 aa20.38■□□□□ 0.85
CLIP2-201ENST00000223398 PCP11498 1178 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 PPP2R5CQ13362 524 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 IPO4Q8TEX9 1081 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 PPM1EQ8WY54 764 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 DHX36Q9H2U1 1008 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 GALNT17Q6IS24 598 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 SYMPKQ92797 1274 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 ARHGEF1Q92888 912 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 MAPK8IP2Q13387 824 aaPredicted RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 KMT5BQ4FZB7 885 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 MAP4K1Q92918 833 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 STIM2Q9P246 746 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 RRP9O43818 475 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 COBLO75128 1261 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 BSPRYQ5W0U4 402 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 CAPN9O14815 690 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 ZEB2O60315 1214 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 CFAP157Q5JU67 520 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 ODR4Q5SWX8 454 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 GPR161Q8N6U8 529 aaKnown RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 GJD4Q96KN9 370 aaPredicted RBP20.37■□□□□ 0.85
CLIP2-201ENST00000223398 ZNF341Q9BYN7 854 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.37■□□□□ 0.857e-7■■■■□ 20.2
CLIP2-201ENST00000223398 ASIC3Q9UHC3 531 aa20.37■□□□□ 0.85
CLIP2-201ENST00000223398 YWHAEP62258 255 aaKnown RBP20.36■□□□□ 0.85
CLIP2-201ENST00000223398 CACNB1Q02641 598 aaPredicted RBP20.36■□□□□ 0.85
CLIP2-201ENST00000223398 PTPROQ16827 1216 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 ADD3Q9UEY8 706 aaKnown RBP20.36■□□□□ 0.85
CLIP2-201ENST00000223398 TUBB4AP04350 444 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 ZNF75DP51815 510 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 KLHL7Q8IXQ5 586 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 POMGNT1Q8WZA1 660 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 RPS6KC1Q96S38 1066 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 ZNF277Q9NRM2 450 aaPredicted RBP20.36■□□□□ 0.85
CLIP2-201ENST00000223398 COL4A3BPQ9Y5P4 624 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 PPARDQ03181 441 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 PREX2Q70Z35 1606 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 SYDE2Q5VT97 1194 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 CASC4Q6P4E1 433 aa20.36■□□□□ 0.85
CLIP2-201ENST00000223398 CCDC84Q86UT8 332 aaPredicted RBP20.36■□□□□ 0.85
CLIP2-201ENST00000223398 INO80B-WBP1J3KQ70 363 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 C8orf74Q6P047 294 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 INO80BQ9C086 356 aaPredicted RBP20.35■□□□□ 0.85
CLIP2-201ENST00000223398 ARMCX3Q9UH62 379 aaPredicted RBP20.35■□□□□ 0.85
CLIP2-201ENST00000223398 KCNJ18B7U540 433 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 CALRP27797 417 aaKnown RBP20.35■□□□□ 0.85
CLIP2-201ENST00000223398 KCNJ12Q14500 433 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 PLEKHA4Q9H4M7 779 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 SYNJ2BP-COX16A0A087WUM0 186 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 C1orf112Q9NSG2 853 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 COX16Q9P0S2 106 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 COL15A1P39059 1388 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 CRCPO75575 148 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 MORC3Q14149 939 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 CCDC6Q16204 474 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 PPM1KQ8N3J5 372 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 PARP2Q9UGN5 583 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 NUB1Q9Y5A7 615 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 TDRD3Q9H7E2 651 aaKnown RBP20.35■□□□□ 0.85
CLIP2-201ENST00000223398 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
CLIP2-201ENST00000223398 ATF7P17544 494 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms