RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 COA7Q96BR5 231 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 ADAM9Q13443 819 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 SUSD4Q5VX71 490 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 GOLGA6CA6NDK9 693 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 GOLGA6DP0CG33 693 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 CCDC14Q49A88 953 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 CFAP221Q4G0U5 840 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 EPHA10Q5JZY3 1008 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 CASC4Q6P4E1 433 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 PPM1KQ8N3J5 372 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 GOLGA6AQ9NYA3 693 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 GUCY2FP51841 1108 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 TAB3Q8N5C8 712 aaPredicted RBP20.78■□□□□ 0.92
MBD3-201ENST00000156825 LIG4P49917 911 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 ERCC6LQ2NKX8 1250 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
MBD3-201ENST00000156825 GJB4Q9NTQ9 266 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 DDX41Q9UJV9 622 aaKnown RBP20.78■□□□□ 0.92
MBD3-201ENST00000156825 STK24Q9Y6E0 443 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 RASGRF1Q13972 1273 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 MYRIPQ8NFW9 859 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 KIAA1524Q8TCG1 905 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 NACA2Q9H009 215 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 DPCR1Q3MIW9 517 aa20.78■□□□□ 0.92
MBD3-201ENST00000156825 TRPC5Q9UL62 973 aaPredicted RBP20.78■□□□□ 0.92
MBD3-201ENST00000156825 NPHP4O75161 1426 aaPredicted RBP20.78■□□□□ 0.92
MBD3-201ENST00000156825 LRRIQ4A6NIV6 560 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 KCNK3O14649 394 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 CYP27B1O15528 508 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 GTPBP6O43824 516 aaPredicted RBP20.77■□□□□ 0.92
MBD3-201ENST00000156825 HSPA1LP34931 641 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 CCDC117Q8IWD4 279 aaPredicted RBP20.77■□□□□ 0.92
MBD3-201ENST00000156825 SAR1BQ9Y6B6 198 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 SETDB1Q15047 1291 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 PIGSQ96S52 555 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 GPR108Q9NPR9 543 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 GOLGA6BA6NDN3 693 aa20.77■□□□□ 0.92
MBD3-201ENST00000156825 YARSP54577 528 aaKnown RBP20.77■□□□□ 0.91
MBD3-201ENST00000156825 SLC39A14Q15043 492 aa20.77■□□□□ 0.91
MBD3-201ENST00000156825 USP17L3A6NCW0 530 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 USP17L4A6NCW7 530 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 LONRF2Q1L5Z9 754 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 MAP7D1Q3KQU3 841 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 USP17L1Q7RTZ2 530 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 LEMD3Q9Y2U8 911 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 MIGA2Q7L4E1 593 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 ANKFY1Q9P2R3 1169 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 AXIN2Q9Y2T1 843 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 HEG1Q9ULI3 1381 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 CNGA1P29973 690 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 AS3MTQ9HBK9 375 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 CLUL1Q15846 466 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 SULF1Q8IWU6 871 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 MMS19Q96T76 1030 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 LARSQ9P2J5 1176 aaKnown RBP20.76■□□□□ 0.91
MBD3-201ENST00000156825 PPP2R2CQ9Y2T4 447 aa20.76■□□□□ 0.91
MBD3-201ENST00000156825 SEMA3EO15041 775 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 ODR4Q5SWX8 454 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 AMNQ9BXJ7 453 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 ARMCX5Q6P1M9 558 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 SCYL2Q6P3W7 929 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 MEIS1O00470 390 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 UHMK1Q8TAS1 419 aaKnown RBP20.75■□□□□ 0.91
MBD3-201ENST00000156825 SPATA1Q5VX52 437 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 NAA35Q5VZE5 725 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 CAPN12Q6ZSI9 719 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 TEKT3Q9BXF9 490 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 SERPINB13Q9UIV8 391 aa20.75■□□□□ 0.91
MBD3-201ENST00000156825 SNX16P57768 344 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 LLGL1Q15334 1064 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 DCAF15Q66K64 600 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 INTS8Q75QN2 995 aaKnown RBP20.74■□□□□ 0.91
MBD3-201ENST00000156825 SESTD1Q86VW0 696 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 SLFN12Q8IYM2 578 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 SMC1BQ8NDV3 1235 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 TBCKQ8TEA7 893 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 CCDC160A6NGH7 325 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 CACNB3P54284 484 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 LRRC8AQ8IWT6 810 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 IFRD2Q12894 506 aaPredicted RBP20.74■□□□□ 0.91
MBD3-201ENST00000156825 C11orf57Q6ZUT1 292 aaPredicted RBP20.74■□□□□ 0.91
MBD3-201ENST00000156825 AMFRQ9UKV5 643 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 GAS8O95995 478 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.74■□□□□ 0.91
MBD3-201ENST00000156825 ZNF215Q9UL58 517 aaPredicted RBP20.74■□□□□ 0.91
MBD3-201ENST00000156825 SAMD9LQ8IVG5 1584 aa20.74■□□□□ 0.91
MBD3-201ENST00000156825 KRT15P19012 456 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 SNAP25P60880 206 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 KRT71Q3SY84 523 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 RNF26Q9BY78 433 aaPredicted RBP20.73■□□□□ 0.91
MBD3-201ENST00000156825 PYCARDQ9ULZ3 195 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 COL4A3BPQ9Y5P4 624 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 ARHGEF5Q12774 1597 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 M0QZ92 97 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 CASP14P31944 242 aa20.73■□□□□ 0.91
MBD3-201ENST00000156825 KIF23Q02241 960 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms