RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 KRT23Q9C075 422 aa29.3■■■□□ 2.28
TSR3-201ENST00000007390 ACAD9Q9H845 621 aa29.3■■■□□ 2.28
TSR3-201ENST00000007390 SGSM2O43147 1006 aa29.29■■■□□ 2.28
TSR3-201ENST00000007390 PRAMEF19Q5SWL8 479 aa29.29■■■□□ 2.28
TSR3-201ENST00000007390 TTBK2Q6IQ55 1244 aa29.29■■■□□ 2.28
TSR3-201ENST00000007390 MAMDC4Q6UXC1 1216 aa29.29■■■□□ 2.28
TSR3-201ENST00000007390 ZKSCAN3Q9BRR0 538 aa29.29■■■□□ 2.28
TSR3-201ENST00000007390 RANBP17Q9H2T7 1088 aaKnown RBP29.29■■■□□ 2.28
TSR3-201ENST00000007390 RNF146Q9NTX7 359 aa29.29■■■□□ 2.28
TSR3-201ENST00000007390 SYNGAP1Q96PV0 1343 aa29.28■■■□□ 2.28
TSR3-201ENST00000007390 ZNF543Q08ER8 600 aa29.28■■■□□ 2.28
TSR3-201ENST00000007390 SYDE2Q5VT97 1194 aa29.28■■■□□ 2.28
TSR3-201ENST00000007390 HOMER2Q9NSB8 354 aa29.28■■■□□ 2.28
TSR3-201ENST00000007390 ZSWIM5Q9P217 1185 aa29.28■■■□□ 2.28
TSR3-201ENST00000007390 FRMPD2Q68DX3 1309 aaPredicted RBP29.27■■■□□ 2.28
TSR3-201ENST00000007390 SLC16A2P36021 539 aa29.27■■■□□ 2.28
TSR3-201ENST00000007390 PTH1RQ03431 593 aa29.27■■■□□ 2.28
TSR3-201ENST00000007390 CCDC174Q6PII3 467 aa29.27■■■□□ 2.28
TSR3-201ENST00000007390 ZSCAN10Q96SZ4 725 aaPredicted RBP29.27■■■□□ 2.28
TSR3-201ENST00000007390 ALPK3Q96L96 1907 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 DNM1LO00429 736 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 ICAM1P05362 532 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 SNAP25P60880 206 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 FGD4Q96M96 766 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 GPCPD1Q9NPB8 672 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 CNPY2Q9Y2B0 182 aa29.26■■■□□ 2.27
TSR3-201ENST00000007390 U3KPZ7 1027 aaPredicted RBP29.26■■■□□ 2.27
TSR3-201ENST00000007390 ZNF865P0CJ78 1059 aaPredicted RBP29.25■■■□□ 2.27
TSR3-201ENST00000007390 GPATCH4Q5T3I0 446 aaKnown RBP29.25■■■□□ 2.27
TSR3-201ENST00000007390 ENAHQ8N8S7 591 aaPredicted RBP29.25■■■□□ 2.27
TSR3-201ENST00000007390 ARRDC4Q8NCT1 418 aa29.25■■■□□ 2.27
TSR3-201ENST00000007390 PNMA1Q8ND90 353 aa29.25■■■□□ 2.27
TSR3-201ENST00000007390 TRERF1Q96PN7 1200 aa29.25■■■□□ 2.27
TSR3-201ENST00000007390 A1CFQ9NQ94 594 aaKnown RBP29.25■■■□□ 2.27
TSR3-201ENST00000007390 CCPG1Q9ULG6 757 aa29.25■■■□□ 2.27
TSR3-201ENST00000007390 ALAS1P13196 640 aa29.24■■■□□ 2.27
TSR3-201ENST00000007390 TAL1P17542 331 aaPredicted RBP29.24■■■□□ 2.27
TSR3-201ENST00000007390 FAM133AQ8N9E0 248 aa29.24■■■□□ 2.27
TSR3-201ENST00000007390 KAT14Q9H8E8 782 aa29.24■■■□□ 2.27
TSR3-201ENST00000007390 TNKSO95271 1327 aa29.23■■■□□ 2.27
TSR3-201ENST00000007390 SNAI1O95863 264 aaPredicted RBP29.23■■■□□ 2.27
TSR3-201ENST00000007390 CYP21A2P08686 494 aa29.23■■■□□ 2.27
TSR3-201ENST00000007390 ANO1Q5XXA6 986 aa29.23■■■□□ 2.27
TSR3-201ENST00000007390 UBAC1Q9BSL1 405 aa29.23■■■□□ 2.27
TSR3-201ENST00000007390 PNMA2Q9UL42 364 aa29.23■■■□□ 2.27
TSR3-201ENST00000007390 RANBP2P49792 3224 aaKnown RBP29.23■■■□□ 2.27
TSR3-201ENST00000007390 DNAH12Q6ZR08 3092 aa29.22■■■□□ 2.27
TSR3-201ENST00000007390 POTEB2H3BUK9 544 aa29.22■■■□□ 2.27
TSR3-201ENST00000007390 RARBP10826 455 aa29.21■■■□□ 2.27
TSR3-201ENST00000007390 AKR1A1P14550 325 aa29.21■■■□□ 2.27
TSR3-201ENST00000007390 MUM1L1Q5H9M0 696 aa29.21■■■□□ 2.27
TSR3-201ENST00000007390 HABP4Q5JVS0 413 aaKnown RBP29.21■■■□□ 2.27
TSR3-201ENST00000007390 MAP4K1Q92918 833 aa29.21■■■□□ 2.27
TSR3-201ENST00000007390 COLQQ9Y215 455 aaPredicted RBP29.21■■■□□ 2.27
TSR3-201ENST00000007390 CNTN2Q02246 1040 aa29.2■■■□□ 2.26
TSR3-201ENST00000007390 TRDNQ13061 729 aa29.2■■■□□ 2.26
TSR3-201ENST00000007390 BMP2KLQ5H9B9 411 aa29.2■■■□□ 2.26
TSR3-201ENST00000007390 GJC2Q5T442 439 aaPredicted RBP29.2■■■□□ 2.26
TSR3-201ENST00000007390 C7orf61Q8IZ16 206 aa29.2■■■□□ 2.26
TSR3-201ENST00000007390 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.2■■■□□ 2.26
TSR3-201ENST00000007390 CYP39A1Q9NYL5 469 aa29.2■■■□□ 2.26
TSR3-201ENST00000007390 WDR19Q8NEZ3 1342 aa29.2■■■□□ 2.26
TSR3-201ENST00000007390 KBTBD13C9JR72 458 aa29.19■■■□□ 2.26
TSR3-201ENST00000007390 SEC23AQ15436 765 aa29.19■■■□□ 2.26
TSR3-201ENST00000007390 LRRC26Q2I0M4 334 aa29.19■■■□□ 2.26
TSR3-201ENST00000007390 SENP6Q9GZR1 1112 aaPredicted RBP29.19■■■□□ 2.26
TSR3-201ENST00000007390 ABHD16BQ9H3Z7 469 aa29.19■■■□□ 2.26
TSR3-201ENST00000007390 XPNPEP3Q9NQH7 507 aa29.19■■■□□ 2.26
TSR3-201ENST00000007390 GOLGA8HP0CJ92 632 aa29.18■■■□□ 2.26
TSR3-201ENST00000007390 LRRC41Q15345 812 aa29.18■■■□□ 2.26
TSR3-201ENST00000007390 ASPRV1Q53RT3 343 aa29.18■■■□□ 2.26
TSR3-201ENST00000007390 CHRDL2Q6WN34 429 aa29.18■■■□□ 2.26
TSR3-201ENST00000007390 CYB5R4Q7L1T6 521 aa29.18■■■□□ 2.26
TSR3-201ENST00000007390 ARMCX2Q7L311 632 aa29.18■■■□□ 2.26
TSR3-201ENST00000007390 ACVR2BQ13705 512 aa29.17■■■□□ 2.26
TSR3-201ENST00000007390 IFIT1BQ5T764 474 aaKnown RBP29.17■■■□□ 2.26
TSR3-201ENST00000007390 PRO3102Q9H379 93 aa29.17■■■□□ 2.26
TSR3-201ENST00000007390 ZHX1Q9UKY1 873 aaPredicted RBP29.17■■■□□ 2.26
TSR3-201ENST00000007390 FAM184BQ9ULE4 1060 aa29.17■■■□□ 2.26
TSR3-201ENST00000007390 SMCHD1A6NHR9 2005 aa29.16■■■□□ 2.26
TSR3-201ENST00000007390 SOWAHBA6NEL2 793 aa29.16■■■□□ 2.26
TSR3-201ENST00000007390 CCDC144CPQ8IYA2 1237 aa29.16■■■□□ 2.26
TSR3-201ENST00000007390 RBM8AQ9Y5S9 174 aaKnown RBP29.16■■■□□ 2.26
TSR3-201ENST00000007390 TAF6LQ9Y6J9 622 aa29.16■■■□□ 2.26
TSR3-201ENST00000007390 TRIOBPQ9H2D6 2365 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 ASB14A6NK59 587 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 E7EWF7 191 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 NSMFQ6X4W1 530 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 KIAA1211Q6ZU35 1233 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 ESYT1Q9BSJ8 1104 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 UBA5Q9GZZ9 404 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 KATNBL1Q9H079 304 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 ASTN1O14525 1302 aa29.15■■■□□ 2.26
TSR3-201ENST00000007390 NFIBO00712 420 aa29.14■■■□□ 2.26
TSR3-201ENST00000007390 CENPBP07199 599 aaPredicted RBP29.14■■■□□ 2.26
TSR3-201ENST00000007390 RALYLQ86SE5 291 aaKnown RBP29.14■■■□□ 2.26
TSR3-201ENST00000007390 RNF180Q86T96 592 aa29.14■■■□□ 2.26
TSR3-201ENST00000007390 SKAP1Q86WV1 359 aa29.14■■■□□ 2.26
TSR3-201ENST00000007390 NCOA7Q8NI08 942 aa29.14■■■□□ 2.26
TSR3-201ENST00000007390 CLEC4DQ8WXI8 215 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms