RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TRIM21P19474 475 aaKnown RBP15.73■□□□□ 0.11
USH1C-201ENST00000005226 TUBGCP2Q9BSJ2 902 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 NHEJ1Q9H9Q4 299 aaPredicted RBP15.73■□□□□ 0.11
USH1C-201ENST00000005226 JADE2Q9NQC1 790 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 SMARCAL1Q9NZC9 954 aa15.73■□□□□ 0.11
USH1C-201ENST00000005226 NTSR2O95665 410 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 GGCXP38435 758 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 MATR3P43243 847 aaKnown RBP eCLIP15.72■□□□□ 0.11
USH1C-201ENST00000005226 CRKLP46109 303 aaKnown RBP15.72■□□□□ 0.11
USH1C-201ENST00000005226 DTHD1Q6ZMT9 781 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 HDAC7Q8WUI4 952 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 FAM84BQ96KN1 310 aaPredicted RBP15.72■□□□□ 0.11
USH1C-201ENST00000005226 DUSP9Q99956 384 aaKnown RBP15.72■□□□□ 0.11
USH1C-201ENST00000005226 BRIP1Q9BX63 1249 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 TBC1D8BQ0IIM8 1120 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 RCSD1Q6JBY9 416 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 DCP1AQ9NPI6 582 aaPredicted RBP15.72■□□□□ 0.11
USH1C-201ENST00000005226 MAGEC2Q9UBF1 373 aaPredicted RBP15.72■□□□□ 0.11
USH1C-201ENST00000005226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
USH1C-201ENST00000005226 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
USH1C-201ENST00000005226 DCCP43146 1447 aa15.72■□□□□ 0.11
USH1C-201ENST00000005226 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 USP17L8P0C7I0 530 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 FCER1AP12319 257 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 LONP1P36776 959 aaKnown RBP15.71■□□□□ 0.11
USH1C-201ENST00000005226 ATP6V1AP38606 617 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 UBA7P41226 1012 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 MECOMQ03112 1051 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 ANKRD40Q6AI12 368 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 TTI2Q6NXR4 508 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 BICDL1Q6ZP65 573 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 DYNLL2Q96FJ2 89 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 ZNF263O14978 683 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 IDEP14735 1019 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 SLC20A2Q08357 652 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 STIM1Q13586 685 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 SLC35G1Q2M3R5 365 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 PAPD7Q5XG87 772 aaKnown RBP15.71■□□□□ 0.11
USH1C-201ENST00000005226 EHD4Q9H223 541 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 EHD2Q9NZN4 543 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 LRWD1Q9UFC0 647 aa15.71■□□□□ 0.11
USH1C-201ENST00000005226 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
USH1C-201ENST00000005226 PRPF6O94906 941 aaKnown RBP15.7■□□□□ 0.1
USH1C-201ENST00000005226 PRDX5P30044 214 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 TUBB4BP68371 445 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 STK4Q13043 487 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 ERFEQ4G0M1 354 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 CCDC178Q5BJE1 867 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 AFAP1L1Q8TED9 768 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 TSPYL1Q9H0U9 437 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 MLXIPQ9HAP2 919 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 TAF1P21675 1872 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 ZNF804BA4D1E1 1349 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 PDS5AQ29RF7 1337 aaKnown RBP15.7■□□□□ 0.1
USH1C-201ENST00000005226 LRP5O75197 1615 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 CCDC194A0A1B0GVG4 234 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 EXOC5O00471 708 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 IVLP07476 585 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 FGRP09769 529 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 CXCR5P32302 372 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 TRAPPC10P48553 1259 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 SLC7A5Q01650 507 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 TFAP4Q01664 338 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 NSUN4Q96CB9 384 aaKnown RBP15.7■□□□□ 0.1
USH1C-201ENST00000005226 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 ITGB4P16144 1822 aa15.7■□□□□ 0.1
USH1C-201ENST00000005226 AGPSO00116 658 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 PSMA7O14818 248 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 SRGNP10124 158 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 MTIF2P46199 727 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 CAVIN4Q5BKX8 364 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 HEATR3Q7Z4Q2 680 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 ANKRD18AQ8IVF6 992 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 MSL3Q8N5Y2 521 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 CELF1Q92879 486 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 SELENOOQ9BVL4 669 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 MED4Q9NPJ6 270 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 PCDHA6Q9UN73 950 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 PCDHA8Q9Y5H6 950 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 ANKRD36CQ5JPF3 1778 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 USP17L3A6NCW0 530 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 USP17L4A6NCW7 530 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 KRT86O43790 486 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 DNM2P50570 870 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 KCNQ4P56696 695 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 KRT83P78385 493 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 ATP2B2Q01814 1243 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 ITPK1Q13572 414 aa15.69■□□□□ 0.1
USH1C-201ENST00000005226 ARL6IP4Q66PJ3 421 aaKnown RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 TTC19Q6DKK2 380 aaPredicted RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 CCNI2Q6ZMN8 369 aaPredicted RBP15.69■□□□□ 0.1
USH1C-201ENST00000005226 USP17L1Q7RTZ2 530 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms