RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Fam198bQ3UPI1 517 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Hspa4Q61316 841 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Best3Q6H1V1 669 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 DaglaQ6WQJ1 1044 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Kctd3Q8BFX3 815 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ccdc40Q8BI79 1192 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Klhl30Q8C3F7 581 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 4933428M09RikQ9D3X3 192 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 AllcQ9JHX6 414 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Stk11Q9WTK7 436 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Homer1Q9Z2Y3 366 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Myh7bA2AQP0 1941 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cyp2j7A0A140T8U1 504 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ugt1a6bK9J7B2 531 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Pla2g4bP0C871 782 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Jdp2P97875 163 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Trappc10Q3TLI0 1259 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Pcsk7Q61139 770 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ugt1a6Q64435 531 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ugt1a7cQ6ZQM8 531 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ankk1Q8BZ25 745 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 OplahQ8K010 1288 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gdap1l1Q8VE33 370 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cbx6Q9DBY5 414 aa11.77□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Zscan18E9PUD6 809 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Kcna1P16388 495 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 NppbP40753 121 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nek1P51954 1203 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Fam178bQ24JP3 464 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Chrna5Q2MKA5 467 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ttll12Q3UDE2 639 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Fhdc1Q3ULZ2 1149 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Abcf1Q6P542 837 aaKnown RBP11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Pip5kl1Q6U7H8 395 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tubb2aQ7TMM9 445 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Caps2Q8BUG5 550 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Trerf1Q8BXJ2 1205 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nat10Q8K224 1024 aaKnown RBP11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Washc1Q8VDD8 475 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tab2Q99K90 693 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 LpxnQ99N69 386 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tubb2bQ9CWF2 445 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Sgpp1Q9JI99 430 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tfap4Q9JIZ5 338 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ltbp2O08999 1813 aa11.77□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Myh8P13542 1937 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tex13cD3YU32 604 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 A430078G23RikE9Q7Y4 484 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Samsn1P57725 372 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Wdhd1P59328 1117 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ric8aQ3TIR3 530 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 PsdQ5DTT2 1024 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Cdc37Q61081 379 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Hdac4Q6NZM9 1076 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Znf18Q810A1 556 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Dnm3Q8BZ98 863 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Vps18Q8R307 973 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tmx1Q8VBT0 278 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Pcdhb5Q91XZ5 792 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Sel1lQ9Z2G6 790 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ly75Q60767 1723 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tsc2Q61037 1814 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Gm30191A0A0U1RNT7 187 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Exoc3l2D3YUP5 789 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Gm5134E9QAB5 671 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mdh1P14152 334 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nr5a1P33242 462 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Lig3P97386 1015 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Gja5Q01231 358 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tbc1d2bQ3U0J8 965 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Slc30a9Q5IRJ6 567 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nsrp1Q5NCR9 542 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 TxlnaQ6PAM1 554 aaKnown RBP11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ccdc57Q6PHN1 1016 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 KhnynQ80U38 671 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Asnsd1Q8BFS9 627 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Enox1Q8BHR2 643 aaKnown RBP11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Zfp446Q8C9M8 523 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 PpanQ91YU8 470 aaKnown RBP11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Txnrd3Q99MD6 652 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Scrn1Q9CZC8 414 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Akap8Q9DBR0 687 aaKnown RBP11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Trmt112Q9DCG9 125 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nr2e3Q9QXZ7 395 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nfu1Q9QZ23 255 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Psmd10Q9Z2X2 231 aa11.76□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Palm3A2TJV2 734 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Fam186bD3Z420 943 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Vmn2r68L7N2B3 851 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Eif6O55135 245 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Iqcb1Q8BP00 598 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mei4Q8BRM6 389 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Frat2Q8K025 231 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ddx27Q921N6 760 aaKnown RBP11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Myo1aO88329 1043 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 GmnnO88513 206 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Lamb1P02469 1786 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Eif5P59325 429 aaKnown RBP11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 EgfrQ01279 1210 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Fam71bQ5STT6 665 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms