RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Ifih1Q8R5F7 1025 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Krt34Q9D646 392 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Lrrc32G3XA59 663 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pde4aO89084 844 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 LtbrP50284 415 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Swap70Q6A028 585 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gga3Q8BMI3 718 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 NelfbQ8C4Y3 580 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Slc4a8Q8JZR6 1089 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 PdiltQ9DAN1 588 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gm5114W4VSN8 858 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 NesQ6P5H2 1864 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 FAM186AQ9D9R9 1790 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Serpina16D3Z660 418 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 CnpP16330 420 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 PpardP35396 440 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nek1P51954 1203 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Usp13Q5BKP2 858 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Fbxo11Q7TPD1 930 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ms4a5Q810P8 197 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Brd3Q8K2F0 726 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pcdha12Q91Y18 950 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ly75Q60767 1723 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Clrn2B2RVW2 232 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Znf568E9PYI1 671 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Psmd14O35593 310 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Adgrg6Q6F3F9 1165 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Sval3Q76I99 144 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ano2Q8CFW1 1002 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Fam193aQ8CGI1 1231 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pnma3Q8JZW8 466 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Exoc1Q8R3S6 894 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Inpp4aQ9EPW0 939 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Npr3P70180 536 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Lilrb3P97484 841 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Kdm1aQ6ZQ88 853 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Plcg2Q8CIH5 1265 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Spire2Q8K1S6 718 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Serpina10Q8R121 448 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pspc1Q8R326 523 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Q91WD4 421 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ssr1Q9CY50 286 aaKnown RBP10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 NapaQ9DB05 295 aa10.72□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Atp8b5A3FIN4 1183 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Rasa3Q60790 834 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Lamb3Q61087 1168 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 BC048507Q80ZS7 89 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 EhhadhQ9DBM2 718 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Bpifb4A2BGH0 617 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pla2g4bP0C871 782 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Parp1P11103 1013 aaKnown RBP10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ptgs1P22437 602 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Aco1P28271 889 aaKnown RBP10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ccna1Q61456 421 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Camsap3Q80VC9 1252 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Efhd1Q9D4J1 240 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Chaf1aQ9QWF0 911 aa10.71□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Cdc27A2A6Q5 825 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mageb2A2AHM0 380 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 NefhP19246 1090 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Adssl1P28650 457 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Vmn1r209Q5NC97 312 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tlcd1Q99JT6 247 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tacc2Q9JJG0 1149 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 AmfrQ9R049 643 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Prkab1Q9R078 270 aa10.71□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Rad51bO35719 350 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Snap25P60879 206 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Specc1lQ2KN98 1118 aaKnown RBP10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Psmd1Q3TXS7 953 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Slc10a5Q5PT54 434 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Akap4Q60662 849 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Stxbp3Q60770 592 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ces1Q8VCC2 565 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ipo7Q9EPL8 1038 aaKnown RBP10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Trpc5Q9QX29 975 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Plcb1Q9Z1B3 1216 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Nme9A0A1L1SUL6 329 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Trex1Q91XB0 314 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Tmod2Q9JKK7 351 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Nek3Q9R0A5 511 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Klrc1Q9Z202 244 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Trim55G3X8Y1 545 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Abcd1P48410 736 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 MyrflQ3UN70 904 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Sox30Q8CGW4 782 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ushbp1Q8R370 680 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Mfap3Q922T2 349 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Klhl10Q9D5V2 608 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Ifi35Q9D8C4 286 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Acot3Q9QYR7 432 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 4932429P05RikA2ADI4 785 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Glt1d1A4FUP9 346 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Dnaaf5B9EJR8 853 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Gm5934D3Z4U6 212 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 PRAG1Q571I4 1179 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Alpk1Q9CXB8 1231 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Borcs6Q9D6W8 360 aa10.7□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Rbbp6P97868 1790 aaKnown RBP10.69□□□□□ -0.7
Sh3rf1-202ENSMUST00000209611 Diaph1O08808 1255 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms