RNA–Protein interactions for RNA: ENSMUST00000197054.1

Gm42949-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42949, Length 2,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42949-201ENSMUST00000197054 Rnf220Q6PDX6 566 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 LsampQ8BLK3 341 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Sirt2Q8VDQ8 389 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Wrnip1Q91XU0 660 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 NgrnQ99KS2 293 aaKnown RBP6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Q9D9S1 216 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Cmtm2bQ9DAC0 210 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Fzd5Q9EQD0 585 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Tnfrsf22Q9ER62 198 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Mkrn2Q9ERV1 416 aaKnown RBP6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Golga3P55937 1487 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Pard3Q99NH2 1333 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Pde9aO70628 534 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Arnt2Q61324 712 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Trim46Q7TNM2 759 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Amigo3Q8C2S7 508 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 H2afy2Q8CCK0 372 aaKnown RBP6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Cdca7lQ922M5 438 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Arl13aQ9D416 372 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Spaca1Q9DA48 305 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Serpinb9bQ9DAV6 377 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Usp18Q9WTV6 368 aa6.33□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Kpna6O35345 536 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 NcstnP57716 708 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Krtap4-1Q3UUY3 169 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 WhammQ571B6 793 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Frs2Q8C180 508 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Q8C4P0 716 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 NgefQ8CHT1 710 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 FntbQ8K2I1 437 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Nup133Q8R0G9 1155 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Taf6lQ8R2K4 616 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Smg8Q8VE18 991 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 DaglbQ91WC9 669 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 CmipQ9D486 773 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Aldh6a1Q9EQ20 535 aaKnown RBP6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 EdarQ9R187 448 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ccdc88bQ4QRL3 1481 aa6.32□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Gm42688A0A0R3P9D1 673 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Itga8A2ARA8 1062 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Nfx1B1AY10 1114 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Usp25P57080 1055 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Cdca2Q14B71 982 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Nacc1Q7TSZ8 514 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ccdc142Q8CAI1 738 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ccdc150Q8CDI7 1110 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ccdc87Q8CDL9 855 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Irf2bplQ8K3X4 775 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Prpf4Q9DAW6 521 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Vmn1r53Q9EP93 310 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Odf2A3KGV1 830 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Izumo3A6PWV3 263 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Cops5O35864 334 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Bpifa1P97361 278 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ice2Q3UZ18 988 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Spire1Q52KF3 598 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Lcp1Q61233 627 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Wdr3Q8BHB4 942 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 1700001C19RikQ8K168 210 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Rnf141Q99MB7 230 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Rnf111Q99ML9 989 aa6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Cisd2Q9CQB5 135 aaKnown RBP6.31□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Dhx8A2A4P0 1244 aaKnown RBP6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Nlgn4lB0F2B4 945 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Tmem92B7ZWI3 162 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Vsig10lD3YZF7 868 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Nploc4P60670 608 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Prss55Q14BX2 321 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Swap70Q6A028 585 aaKnown RBP6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Tram1l1Q8QZR0 363 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Gspt1Q8R050 636 aaKnown RBP6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Frmd4bQ920B0 1035 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Scrn1Q9CZC8 414 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Vmn1r40Q9EQ46 310 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Rad18Q9QXK2 509 aaKnown RBP6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Pde7bQ9QXQ1 446 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Sall3Q62255 1320 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Srpk1O70551 648 aaKnown RBP6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Cd160O88875 185 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 NefmP08553 848 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Tarbp2P97473 365 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Gas7Q60780 421 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Foxc1Q61572 553 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 CyldQ80TQ2 952 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 SnupnQ80W37 358 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Fstl5Q8BFR2 847 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Spon2Q8BMS2 330 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Slc24a5Q8C261 501 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 E4f1Q8CCE9 783 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 CcinQ8CDE2 588 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Spns2Q91VM4 549 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Tagln3Q9R1Q8 199 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 TesminQ9WTJ6 475 aa6.3□□□□□ -1.4
Gm42949-201ENSMUST00000197054 PnisrA2AJT4 805 aaKnown RBP6.29□□□□□ -1.4
Gm42949-201ENSMUST00000197054 CtssO70370 340 aa6.29□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Dll3O88516 592 aa6.29□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Pax1P09084 446 aa6.29□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Hoxb2P0C1T1 354 aa6.29□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ly6c1P0CW02 131 aa6.29□□□□□ -1.4
Gm42949-201ENSMUST00000197054 Ly6c2P0CW03 131 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms