RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Cabp7Q91ZM8 215 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Mis18aQ9CZJ6 204 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Myh7bA2AQP0 1941 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Col1a1P11087 1453 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Lamc2Q61092 1191 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ddx27Q921N6 760 aaKnown RBP12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Znf568E9PYI1 671 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Vmn1r209Q5NC97 312 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Armc6Q8BNU0 468 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Brms1Q99N20 246 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Txnrd2Q9JLT4 524 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ercc4Q9QZD4 917 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Mtmr9Q9Z2D0 545 aa12.13□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 StrcQ8VIM6 1809 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Phrf1A6H619 1682 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ankrd35E9Q9D8 996 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Nedd4P46935 887 aaKnown RBP12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Cyp2e1Q05421 493 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Slc2a13Q3UHK1 637 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Oxnad1Q8VE38 311 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 SelenooQ9DBC0 667 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 AdnpQ9Z103 1108 aaKnown RBP12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 NcapgE9PWG6 1004 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Nr1i2O54915 431 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Asic1Q6NXK8 526 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 ErfeQ6PGN1 340 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Mei4Q8BRM6 389 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Rbm42Q91V81 474 aaKnown RBP12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Txndc5Q91W90 417 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Pcdha12Q91Y18 950 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 CsadQ9DBE0 493 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Zfp646Q6NV66 1788 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Myh14Q6URW6 2000 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Zfp831A2ADM8 1628 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Lrrc36Q3V0M2 755 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Igf2bp2Q5SF07 592 aaKnown RBP12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Dpf2Q61103 391 aaKnown RBP12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Gm2163Q6PCY5 473 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Q91WD4 421 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Cdca7Q9D0M2 382 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ifi35Q9D8C4 286 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Plcb1Q9Z1B3 1216 aa12.12□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Btn2a2A4QPC6 514 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Trim30aP15533 496 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Nap1l2P51860 460 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Frat1P70339 274 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 PsdQ5DTT2 1024 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ovgp1Q62010 721 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Tdrd3Q91W18 743 aaKnown RBP12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 4921524L21RikQ9D5T2 438 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Cul5Q9D5V5 780 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ugt1a8D3Z748 530 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ugt1a10E9PXN7 530 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 AoahO35298 574 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ift88Q61371 824 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Cyp4f39Q8BGU0 532 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ccdc122Q8BVN0 290 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Dnm3Q8BZ98 863 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Setdb2Q8C267 713 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 NelfbQ8C4Y3 580 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Azi2Q9QYP6 405 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 TicrrQ8BQ33 1889 aa12.11□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Rsbn1lD3Z0K6 821 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Adssl1P28650 457 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ccdc172Q810N9 267 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Enox1Q8BHR2 643 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Fbxo28Q8BIG4 368 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Cacnb1Q8R3Z5 597 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Pitpnm2Q6ZPQ6 1335 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 A0A1L1SQF0 893 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Prss51A0A286YDY8 319 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ddx23D3Z0M9 819 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Serpina16D3Z660 418 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Gm4307E9PZY4 289 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Gm4312K9J7E2 289 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Stat3P42227 770 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Mcm6P97311 821 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ap5z1Q3U829 807 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Tmed8Q3UHI4 326 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Znf697Q569E7 569 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Krt87Q6IMF0 495 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Asnsd1Q8BFS9 627 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Stac3Q8BZ71 360 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Hdac9Q99N13 588 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Krt34Q9D646 392 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Nrxn2E9Q7X7 1710 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 CluhQ5SW19 1315 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ccdc88cQ6VGS5 2009 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Cul4bA2A432 970 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Parp2O88554 559 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Pcif1P59114 706 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Gcnt1Q09324 428 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 TfrcQ62351 763 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Fbxo41Q6NS60 873 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Senp6Q6P7W0 1132 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Scfd1Q8BRF7 639 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Riox2Q8CD15 465 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Ano2Q8CFW1 1002 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 NapaQ9DB05 295 aa12.1□□□□□ -0.47
Pcdh20-202ENSMUST00000192557 Git2Q9JLQ2 708 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms